Regulog SMb20039 - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | 1 | 1 |
| Azorhizobium caulinodans ORS 571 | 1 | 1 |
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | 1 | 1 |
| Bradyrhizobium sp. BTAi1 | 1 | 1 |
| Brucella melitensis 16M | 1 | 1 |
| Mesorhizobium loti MAFF303099 | 1 | 1 |
| Mesorhizobium sp. BNC1 | 1 | 1 |
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | 1 | 1 |
| Rhizobium leguminosarum bv. viciae 3841 | 1 | 1 |
| Rhizobium sp. NGR234 | 1 | 1 |
| Rhodopseudomonas palustris CGA009 | ||
| Sinorhizobium meliloti 1021 | 1 | 1 |
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| COG697 |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -106 score = 13.3145 sequence = AACCGTACTGC-(8)-CCATAACAGTT-(6)-TATTGTATCGT Gene: Atu0234: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Azorhizobium caulinodans ORS 571 Site: position = -110 score = 10.7729 sequence = AACTGTGTGGT-(8)-TCCATACTGTT-(6)-AACCGTATGGC Gene: AZC_0293: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
|
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Bradyrhizobium japonicum USDA 110 Site: position = -109 score = 12.73 sequence = AGGTGTACTGC-(8)-CCCATACAGTT-(6)-GATTGTACTGG Gene: bll0403: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Bradyrhizobium sp. BTAi1 Site: position = -105 score = 12.7909 sequence = AAGTGTATCAC-(8)-CCAGTACAGTT-(6)-GATTGTATTGC Gene: BBta_7474: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Brucella melitensis 16M Site: position = -81 score = 12.201 sequence = ATCTGTACCAC-(8)-CCAGTACAGTT-(6)-AATTGTCTGGA Gene: BMEI0170: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Mesorhizobium loti MAFF303099 Site: position = -95 score = 14.2169 sequence = ATCTGTATTGC-(8)-CCATTACAGTT-(6)-AATTGTACCGC Gene: mll1137: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Mesorhizobium sp. BNC1 Site: position = -92 score = 12.3226 sequence = TACTGTACTGC-(7)-AGAGAACAGTT-(6)-AATTGTACCGC Gene: Meso_0254: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
|
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Rhizobium etli CFN 42 Site: position = -205 score = 13.5676 sequence = ATCTGTATTGC-(8)-CCATAACAGTT-(6)-AATCGTATCAG Gene: RHE_CH02665: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -113 score = 13.4083 sequence = ATCCGTATTGC-(8)-CCATTACAGTT-(6)-AATCGTATCAG Gene: RL3117: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Rhizobium sp. NGR234 Site: position = -119 score = 13.0212 sequence = ATCCGTACCGG-(8)-CCATGACAGTT-(6)-AACTGTACTTC Gene: NGR_b00110: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Sinorhizobium meliloti 1021 Site: position = -104 score = 12.8693 sequence = ATCCGTACTGG-(8)-CCATGACAGTT-(6)-AACTGTACCTT Gene: SMb20040: Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
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Permease of the drug/metabolite transporter (DMT) superfamily, COG697(RhaT) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |