Regulog EutR - Comamonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Ectoine utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
- By pathway - Ectoine utilization
| Genome | Genes | Operons |
|---|---|---|
| Acidovorax avenae subsp. citrulli AAC00-1 | ||
| Acidovorax sp. JS42 | ||
| Comamonas testosteroni KF-1 | ||
| Delftia acidovorans SPH-1 | ||
| Leptothrix cholodnii SP-6 | ||
| Methylibium petroleiphilum PM1 | ||
| Polaromonas naphthalenivorans CJ2 | ||
| Polaromonas sp. JS666 | ||
| Rhodoferax ferrireducens DSM 15236 | ||
| Variovorax paradoxus S110 | ||
| Verminephrobacter eiseniae EF01-2 | 10 | 3 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| ehuB |
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Verminephrobacter eiseniae EF01-2 Site: position = -115 score = 5.46633 sequence = ATTGTCCTAGTCCAAT Gene: Veis_2153: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
ectoine/hydroxyectoine ABC transporter, solute-binding protein |
| ehuC |
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Gene: Veis_2154: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
| ehuD |
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Gene: Veis_2155: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
| ehuA |
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Gene: Veis_2156: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
| CRON 2. | ||||||||||||
| eutB |
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Verminephrobacter eiseniae EF01-2 Site: position = -72 score = 4.94471 sequence = CGTGTCCTAGGACAAT Gene: Veis_2151: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
| eutC |
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Gene: Veis_2150: ectoine utilization protein EutC |
ectoine utilization protein EutC |
| eutD |
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Gene: Veis_2149: ectoine utilization protein EutD, dipeptidase |
ectoine utilization protein EutD, dipeptidase |
| eutE |
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Gene: Veis_2148: ectoine utilization protein EutE, deacylase |
ectoine utilization protein EutE, deacylase |
| doeX |
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Gene: Veis_2147: Transcriptional regulator, AsnC family |
Transcriptional regulator, AsnC family |
| CRON 3. | ||||||||||||
| eutR |
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Verminephrobacter eiseniae EF01-2 Site: position = -62 score = 5.46633 sequence = ATTGGACTAGGACAAT Gene: Veis_2152: Transcriptional regulator of ectoine utilization, GntR family |
Transcriptional regulator of ectoine utilization, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |