Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Tola_2572 - Psychromonadaceae/Aeromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 10 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas salmonicida subsp. salmonicida A449
Tolumonas auensis DSM 9187 2 2
Moritella sp. PE36 3 2
Psychromonas ingrahamii 37
Psychromonas sp. CNPT3 2 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Tola_2572
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
*
Tolumonas auensis DSM 9187

Site:
position = -147
score = 5.75798
sequence = AATGACATATGTCAAT

Site:
position = -48
score = 3.86369
sequence = ATTGATATATGTTATC

Gene: Tola_2572: Transcriptional regulator, GntR family
*
Moritella sp. PE36

Site:
position = -155
score = 4.0239
sequence = CTTGTGGTAAGTCAAT

Site:
position = -196
score = 5.75798
sequence = AATGACATATGTCAAT

Gene: PE36_04298: Transcriptional regulator, GntR family
 
Psychromonas ingrahamii 37
*
Psychromonas sp. CNPT3

Site:
position = -263
score = 5.86164
sequence = ATTGACCTATGTCAAT

Gene: PCNPT3_11514: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
 
CRON 2.
COG2084
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
*
Tolumonas auensis DSM 9187

Site:
position = -58
score = 5.75798
sequence = ATTGACATATGTCATT

Site:
position = -157
score = 3.86369
sequence = GATAACATATATCAAT

Gene: Tola_2573: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
*
Moritella sp. PE36

Site:
position = -8
score = 5.75798
sequence = ATTGACATATGTCATT

Site:
position = -49
score = 4.0239
sequence = ATTGACTTACCACAAG

Gene: PE36_04303: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
 
Psychromonas ingrahamii 37

Gene: Ping_2750: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
*
Psychromonas sp. CNPT3

Site:
position = -65
score = 5.86164
sequence = ATTGACATAGGTCAAT

Gene: PCNPT3_11509: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
COG0730
 
Aeromonas hydrophila subsp. hydrophila ATCC 7966
 
Aeromonas salmonicida subsp. salmonicida A449
 
Tolumonas auensis DSM 9187
 
Moritella sp. PE36

Gene: PE36_04308: membrane protein
 
Psychromonas ingrahamii 37
 
Psychromonas sp. CNPT3
membrane protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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