Regulog EutR - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Ectoine utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
- By pathway - Ectoine utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia glumae BGR1 | ||
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia cepacia AMMD | 8 | 2 |
| Burkholderia phymatum STM815 | 12 | 3 |
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | ||
| Burkholderia vietnamiensis G4 | 8 | 2 |
| Burkholderia xenovorans LB400 | 13 | 4 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| eutB |
|
|
*
Burkholderia cepacia AMMD Site: position = -75 score = 5.48984 sequence = AATGTACCAGGACATT Gene: Bamb_6018: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
*
Burkholderia phymatum STM815 Site: position = -124 score = 5.55366 sequence = AATGTACCAGGACAAT Gene: Bphy_3864: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
|
|
*
Burkholderia vietnamiensis G4 Site: position = -75 score = 5.10201 sequence = AATGTATCAGGACATT Gene: Bcep1808_5464: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
*
Burkholderia xenovorans LB400 Site: position = -158 score = 5.40251 sequence = AATGAACTAGGACAAT Gene: Bxe_C0056: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
| eutC |
|
|
Gene: Bamb_6019: ectoine utilization protein EutC |
Gene: Bphy_3863: ectoine utilization protein EutC |
|
|
Gene: Bcep1808_5463: ectoine utilization protein EutC |
Gene: Bxe_C0057: ectoine utilization protein EutC |
ectoine utilization protein EutC |
| eutD |
|
|
Gene: Bamb_6020: ectoine utilization protein EutD, dipeptidase |
Gene: Bphy_3862: ectoine utilization protein EutD, dipeptidase |
|
|
Gene: Bcep1808_5462: ectoine utilization protein EutD, dipeptidase |
*
Burkholderia xenovorans LB400 Site: position = -128 score = 4.86471 sequence = ATTGAACTAGCACATT Site: position = -311 score = 5.19053 sequence = ATTGCTCTAGAACAAT Gene: Bxe_C0063: ectoine utilization protein EutD, dipeptidase |
ectoine utilization protein EutD, dipeptidase |
| eutE |
|
|
Gene: Bamb_6021: ectoine utilization protein EutE, deacylase |
Gene: Bphy_3861: ectoine utilization protein EutE, deacylase |
|
|
Gene: Bcep1808_5461: ectoine utilization protein EutE, deacylase |
Gene: Bxe_C0058: ectoine utilization protein EutE, deacylase |
ectoine utilization protein EutE, deacylase |
| doeX |
|
|
Gene: Bamb_6022: Transcriptional regulator, AsnC family |
Gene: Bphy_3860: Transcriptional regulator, AsnC family |
|
|
Gene: Bcep1808_5460: Transcriptional regulator, AsnC family |
Gene: Bxe_C0059: Transcriptional regulator, AsnC family |
Transcriptional regulator, AsnC family |
| doeC |
|
|
Gene: Bamb_6023: NAD-dependent aldehyde dehydrogenase |
Gene: Bphy_3859: NAD-dependent aldehyde dehydrogenase |
|
|
Gene: Bcep1808_5459: NAD-dependent aldehyde dehydrogenase |
Gene: Bxe_C0060: NAD-dependent aldehyde dehydrogenase |
NAD-dependent aldehyde dehydrogenase |
| doeD |
|
|
Gene: Bamb_6024: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gene: Bphy_3858: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
|
|
Gene: Bcep1808_5458: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gene: Bxe_C0061: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
| CRON 2. | |||||||||
| ehuA |
|
|
|
Gene: Bphy_3869: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
|
|
|
*
Burkholderia xenovorans LB400 Site: position = -240 score = 5.19053 sequence = ATTGTTCTAGAGCAAT Gene: Bxe_C0064: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
| ehuB |
|
|
|
*
Burkholderia phymatum STM815 Site: position = -172 score = 5.43536 sequence = ATTGTCCTAGAGCAAT Gene: Bphy_3866: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
|
|
|
Gene: Bxe_C0065: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
ectoine/hydroxyectoine ABC transporter, solute-binding protein |
| ehuC |
|
|
|
Gene: Bphy_3867: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
|
|
|
Gene: Bxe_C0066: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
| ehuD |
|
|
|
Gene: Bphy_3868: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
|
|
|
Gene: Bxe_C0067: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
| eutA |
|
|
|
|
|
|
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Gene: Bxe_C0068: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
| CRON 3. | |||||||||
| eutR |
|
|
*
Burkholderia cepacia AMMD Site: position = -71 score = 5.64093 sequence = ATTGCACTAGGACAAT Gene: Bamb_6017: Transcriptional regulator of ectoine utilization, GntR family |
*
Burkholderia phymatum STM815 Site: position = -83 score = 5.43536 sequence = ATTGCTCTAGGACAAT Gene: Bphy_3865: Transcriptional regulator of ectoine utilization, GntR family |
|
|
*
Burkholderia vietnamiensis G4 Site: position = -71 score = 5.64093 sequence = ATTGCACTAGGACAAT Gene: Bcep1808_5465: Transcriptional regulator of ectoine utilization, GntR family |
*
Burkholderia xenovorans LB400 Site: position = -105 score = 5.37154 sequence = AATGCTCTAGGACAAT Gene: Bxe_C0055: Transcriptional regulator of ectoine utilization, GntR family |
Transcriptional regulator of ectoine utilization, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |