Regulog Bamb_1959 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Alkanesulfonates utilization
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Alkanesulfonates utilization

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD	6	2
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383	6	2
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
Bamb_1958	* Burkholderia cepacia AMMD Site: position = -307 score = 5.92498 sequence = ACTTGTTATGACAAGA Gene: Bamb_1958: Predicted alkanesulfonates transporter, MFS superfamily	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -317 score = 5.92498 sequence = ACTTGTTATGACAAGA Gene: Bcep18194_A5285: Predicted alkanesulfonates transporter, MFS superfamily	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Predicted alkanesulfonates transporter, MFS superfamily

CRON 2.
Bamb_1959	* Burkholderia cepacia AMMD Site: position = -22 score = 5.92498 sequence = TCTTGTCATAACAAGT Gene: Bamb_1959: Putative alkanesulfonate metabolism utilization regulator, GntR family	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -22 score = 5.92498 sequence = TCTTGTCATAACAAGT Gene: Bcep18194_A5286: Putative alkanesulfonate metabolism utilization regulator, GntR family	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Putative alkanesulfonate metabolism utilization regulator, GntR family
PA2298	Burkholderia cepacia AMMD Gene: Bamb_1960: Putative reductase (alkanesulfonate metabolism)	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_A5287: Putative reductase (alkanesulfonate metabolism)	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Putative reductase (alkanesulfonate metabolism)
PA2297	Burkholderia cepacia AMMD Gene: Bamb_1961: Probable ferredoxin	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_A5288: Probable ferredoxin	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Probable ferredoxin
PA2293	Burkholderia cepacia AMMD Gene: Bamb_1962: FOG: HEAT repeat	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_A5289: FOG: HEAT repeat	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	FOG: HEAT repeat
PA2292	Burkholderia cepacia AMMD Gene: Bamb_1963: hypothetical protein	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_A5290: hypothetical protein	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Bamb_1959 - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --