Regulog CJA_2253 - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Alkanesulfonates utilization
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

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Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By TF family - GntR/Others
By pathway - Alkanesulfonates utilization

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Marinobacter aqueolei
Marinobacter sp. ELB17
Cellvibrio japonicus Ueda107	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
CJA_2253	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	* Cellvibrio japonicus Ueda107 Site: position = -43 score = 6.37142 sequence = ACTTGTTATAACAAGT Gene: CJA_2253: Putative alkanesulfonate metabolism utilization regulator, GntR family	Putative alkanesulfonate metabolism utilization regulator, GntR family
PA2298	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2254: Putative reductase (alkanesulfonate metabolism)	Putative reductase (alkanesulfonate metabolism)
PA2297	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2255: Probable ferredoxin	Probable ferredoxin
PA2296	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2256: Alkanesulfonates ABC transporter, substrate-binding protein	Alkanesulfonates ABC transporter, substrate-binding protein
PA2295	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2257: Alkanesulfonates ABC transporter, permease protein	Alkanesulfonates ABC transporter, permease protein
PA2294	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2258: Alkanesulfonates ABC transporter, ATPase component	Alkanesulfonates ABC transporter, ATPase component
PA2293	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2259: FOG: HEAT repeat protein	FOG: HEAT repeat protein
PA2292	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Marinobacter aqueolei	Marinobacter sp. ELB17	Cellvibrio japonicus Ueda107 Gene: CJA_2260: hypothetical protein	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog CJA_2253 - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --