Regulog PA2299 - Pseudomonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Alkanesulfonates utilization
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - GntR/Others
By pathway - Alkanesulfonates utilization

Statistics of regulated genes
Genome	Genes	Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1	8	1
Pseudomonas entomophila L48	5	1
Pseudomonas fluorescens Pf-5
Pseudomonas mendocina ymp
Pseudomonas putida KT2440	8	1
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
PA2299	Azotobacter vinelandii AvOP	* Pseudomonas aeruginosa PAO1 Site: position = -47 score = 6.37142 sequence = ACTTGTTATAACAAGT Gene: PA2299: Putative alkanesulfonate metabolism utilization regulator, GntR family	* Pseudomonas entomophila L48 Site: position = -37 score = 6.37142 sequence = ACTTGTTATAACAAGT Gene: PSEEN0174: Putative alkanesulfonate metabolism utilization regulator, GntR family	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	* Pseudomonas putida KT2440 Site: position = -38 score = 6.02912 sequence = ACTTGTTATAACGAGT Gene: PP0204: Putative alkanesulfonate metabolism utilization regulator, GntR family	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Putative alkanesulfonate metabolism utilization regulator, GntR family
PA2298	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2298: Putative reductase (alkanesulfonate metabolism)	Pseudomonas entomophila L48 Gene: PSEEN0175: Putative reductase (alkanesulfonate metabolism)	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0205: Putative reductase (alkanesulfonate metabolism)	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Putative reductase (alkanesulfonate metabolism)
PA2297	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2297: Probable ferredoxin	Pseudomonas entomophila L48 Gene: PSEEN0176: Probable ferredoxin	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0206: Probable ferredoxin	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Probable ferredoxin
PA2296	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2296: Alkanesulfonates ABC transporter, substrate-binding protein	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0207: Alkanesulfonates ABC transporter, substrate-binding protein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Alkanesulfonates ABC transporter, substrate-binding protein
PA2295	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2295: Alkanesulfonates ABC transporter, permease protein	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0208: Alkanesulfonates ABC transporter, permease protein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Alkanesulfonates ABC transporter, permease protein
PA2294	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2294: Alkanesulfonates ABC transporter, ATPase component	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0209: Alkanesulfonates ABC transporter, ATPase component	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Alkanesulfonates ABC transporter, ATPase component
PA2293	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2293: FOG: HEAT repeat protein	Pseudomonas entomophila L48 Gene: PSEEN0177: FOG: HEAT repeat protein	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0210: FOG: HEAT repeat protein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	FOG: HEAT repeat protein
PA2292	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2292: hypothetical protein	Pseudomonas entomophila L48 Gene: PSEEN0178: hypothetical protein	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440 Gene: PP0211: hypothetical protein	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PA2299 - Pseudomonadaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --