Regulog PA2299 - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Alkanesulfonates utilization |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/Others
- By pathway - Alkanesulfonates utilization
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | ||
| Pseudomonas aeruginosa PAO1 | 8 | 1 |
| Pseudomonas entomophila L48 | 5 | 1 |
| Pseudomonas fluorescens Pf-5 | ||
| Pseudomonas mendocina ymp | ||
| Pseudomonas putida KT2440 | 8 | 1 |
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| PA2299 |
|
*
Pseudomonas aeruginosa PAO1 Site: position = -47 score = 6.37142 sequence = ACTTGTTATAACAAGT Gene: PA2299: Putative alkanesulfonate metabolism utilization regulator, GntR family |
*
Pseudomonas entomophila L48 Site: position = -37 score = 6.37142 sequence = ACTTGTTATAACAAGT Gene: PSEEN0174: Putative alkanesulfonate metabolism utilization regulator, GntR family |
|
|
*
Pseudomonas putida KT2440 Site: position = -38 score = 6.02912 sequence = ACTTGTTATAACGAGT Gene: PP0204: Putative alkanesulfonate metabolism utilization regulator, GntR family |
|
|
Putative alkanesulfonate metabolism utilization regulator, GntR family |
| PA2298 |
|
Gene: PA2298: Putative reductase (alkanesulfonate metabolism) |
Gene: PSEEN0175: Putative reductase (alkanesulfonate metabolism) |
|
|
Gene: PP0205: Putative reductase (alkanesulfonate metabolism) |
|
|
Putative reductase (alkanesulfonate metabolism) |
| PA2297 |
|
Gene: PA2297: Probable ferredoxin |
Gene: PSEEN0176: Probable ferredoxin |
|
|
Gene: PP0206: Probable ferredoxin |
|
|
Probable ferredoxin |
| PA2296 |
|
Gene: PA2296: Alkanesulfonates ABC transporter, substrate-binding protein |
|
|
|
Gene: PP0207: Alkanesulfonates ABC transporter, substrate-binding protein |
|
|
Alkanesulfonates ABC transporter, substrate-binding protein |
| PA2295 |
|
Gene: PA2295: Alkanesulfonates ABC transporter, permease protein |
|
|
|
Gene: PP0208: Alkanesulfonates ABC transporter, permease protein |
|
|
Alkanesulfonates ABC transporter, permease protein |
| PA2294 |
|
Gene: PA2294: Alkanesulfonates ABC transporter, ATPase component |
|
|
|
Gene: PP0209: Alkanesulfonates ABC transporter, ATPase component |
|
|
Alkanesulfonates ABC transporter, ATPase component |
| PA2293 |
|
Gene: PA2293: FOG: HEAT repeat protein |
Gene: PSEEN0177: FOG: HEAT repeat protein |
|
|
Gene: PP0210: FOG: HEAT repeat protein |
|
|
FOG: HEAT repeat protein |
| PA2292 |
|
Gene: PA2292: hypothetical protein |
Gene: PSEEN0178: hypothetical protein |
|
|
Gene: PP0211: hypothetical protein |
|
|
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |