Regulog Atu2740 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - GntR/Others
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)	9	3
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42
Rhizobium leguminosarum bv. viciae 3841
Rhizobium sp. NGR234
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021	9	3
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
Atu2739	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -112 score = 4.91856 sequence = GTTGTCTGATAAC Gene: Atu2739: putative D-2-hydroxyglutarate dehydrogenase	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -124 score = 4.91856 sequence = GTTGTCTGATAAC Gene: SMa0244: putative D-2-hydroxyglutarate dehydrogenase	Xanthobacter autotrophicus Py2	putative D-2-hydroxyglutarate dehydrogenase
Atu2740	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2740: Transcriptional regulator, GntR family	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0246: Transcriptional regulator, GntR family	Xanthobacter autotrophicus Py2	Transcriptional regulator, GntR family

CRON 2.
Atu2738	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -94 score = 4.91856 sequence = GTTATCAGACAAC Gene: Atu2738: Nucleoside-diphosphate-sugar epimerases	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -83 score = 4.91856 sequence = GTTATCAGACAAC Gene: SMa0241: Nucleoside-diphosphate-sugar epimerases	Xanthobacter autotrophicus Py2	Nucleoside-diphosphate-sugar epimerases
Atu2737	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2737: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841 Gene: RL3773: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0237: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases	Xanthobacter autotrophicus Py2	3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
Atu2736	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2736: Dihydroxyacid dehydratase/phosphogluconate dehydratase	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1 Gene: Meso_4493: Dihydroxyacid dehydratase/phosphogluconate dehydratase	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_CH03347: Dihydroxyacid dehydratase/phosphogluconate dehydratase	Rhizobium leguminosarum bv. viciae 3841 Gene: RL3772: Dihydroxyacid dehydratase/phosphogluconate dehydratase	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0235: Dihydroxyacid dehydratase/phosphogluconate dehydratase	Xanthobacter autotrophicus Py2	Dihydroxyacid dehydratase/phosphogluconate dehydratase

CRON 3.
Atu2741	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -66 score = 5.58226 sequence = GTTGTCAGACATC Gene: Atu2741: Fumarylacetoacetate (FAA) hydrolase family protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -48 score = 5.58226 sequence = GTTGTCAGACATC Gene: SMa0247: Fumarylacetoacetate (FAA) hydrolase family protein	Xanthobacter autotrophicus Py2	Fumarylacetoacetate (FAA) hydrolase family protein
Atu2742	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2742: TRAP-type C4-dicarboxylate transport system, small permease component	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0249: TRAP-type C4-dicarboxylate transport system, small permease component	Xanthobacter autotrophicus Py2	TRAP-type C4-dicarboxylate transport system, small permease component
Atu2743	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2743: TRAP-type C4-dicarboxylate transport system, large permease component	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0250: TRAP-type C4-dicarboxylate transport system, large permease component	Xanthobacter autotrophicus Py2	TRAP-type C4-dicarboxylate transport system, large permease component
Atu2744	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu2744: TRAP-type C4-dicarboxylate transport system, periplasmic component	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMa0252: TRAP-type C4-dicarboxylate transport system, periplasmic component	Xanthobacter autotrophicus Py2	TRAP-type C4-dicarboxylate transport system, periplasmic component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Atu2740 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --