Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog UraR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/Beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 16 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 7 1
Burkholderia glumae BGR1 7 1
Burkholderia mallei ATCC 23344 7 1
Burkholderia phymatum STM815 7 1
Burkholderia pseudomallei K96243 7 1
Burkholderia sp. 383 7 1
Burkholderia vietnamiensis G4 7 1
Burkholderia xenovorans LB400 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
uraR
*
Burkholderia cepacia AMMD

Site:
position = -47
score = 5.20066
sequence = ATTGTTGACAAT

Site:
position = -190
score = 5.16194
sequence = TTTGTCAACAAA

Gene: Bamb_1954: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia glumae BGR1

Site:
position = -189
score = 5.1813
sequence = ATTGTTGACAAA

Site:
position = -47
score = 5.20066
sequence = ATTGTTGACAAT

Gene: bglu_1g13090: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia mallei ATCC 23344

Site:
position = -56
score = 5.20066
sequence = ATTGTTGACAAT

Site:
position = -199
score = 5.25986
sequence = ATTGTCGACAAA

Gene: BMA1511: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia phymatum STM815

Site:
position = -56
score = 5.20066
sequence = ATTGTTGACAAT

Site:
position = -198
score = 5.2405
sequence = TTTGTCGACAAA

Gene: Bphy_1303: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia pseudomallei K96243

Site:
position = -47
score = 5.20066
sequence = ATTGTTGACAAT

Site:
position = -190
score = 5.25986
sequence = ATTGTCGACAAA

Gene: BPSL2121: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia sp. 383

Site:
position = -190
score = 5.16194
sequence = TTTGTCAACAAA

Site:
position = -47
score = 5.20066
sequence = ATTGTTGACAAT

Gene: Bcep18194_A5281: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia vietnamiensis G4

Site:
position = -190
score = 5.2405
sequence = TTTGTCGACAAA

Site:
position = -47
score = 5.20066
sequence = ATTGTTGACAAT

Gene: Bcep1808_1891: Predicted transcriptional regulator for pyrimidine utilization, GntR family
*
Burkholderia xenovorans LB400

Site:
position = -56
score = 5.20066
sequence = ATTGTTGACAAT

Site:
position = -210
score = 5.16194
sequence = TTTGTTGACAAA

Gene: Bxe_A1922: Predicted transcriptional regulator for pyrimidine utilization, GntR family
Predicted transcriptional regulator for pyrimidine utilization, GntR family
pbuT
 
Burkholderia cepacia AMMD

Gene: Bamb_1953: Xanthine/uracil permease
 
Burkholderia glumae BGR1

Gene: bglu_1g13100: Xanthine/uracil permease
 
Burkholderia mallei ATCC 23344

Gene: BMA1510: Xanthine/uracil permease
 
Burkholderia phymatum STM815

Gene: Bphy_1302: Xanthine/uracil permease
 
Burkholderia pseudomallei K96243

Gene: BPSL2120: Xanthine/uracil permease
 
Burkholderia sp. 383

Gene: Bcep18194_A5280: Xanthine/uracil permease
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1890: Xanthine/uracil permease
 
Burkholderia xenovorans LB400

Gene: Bxe_A1924: Xanthine/uracil permease
Xanthine/uracil permease
hyuE
 
Burkholderia cepacia AMMD

Gene: Bamb_1952: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia glumae BGR1

Gene: bglu_1g13110: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia mallei ATCC 23344

Gene: BMA1509: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia phymatum STM815

Gene: Bphy_1301: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia pseudomallei K96243

Gene: BPSL2119: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia sp. 383

Gene: Bcep18194_A5279: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1889: Hydantoin racemase (EC 5.1.99.-)
 
Burkholderia xenovorans LB400

Gene: Bxe_A1925: Hydantoin racemase (EC 5.1.99.-)
Hydantoin racemase (EC 5.1.99.-)
COG0726
 
Burkholderia cepacia AMMD

Gene: Bamb_1951: putative polysaccharide deacetylase family protein
 
Burkholderia glumae BGR1

Gene: bglu_1g13120: putative polysaccharide deacetylase family protein
 
Burkholderia mallei ATCC 23344

Gene: BMA1508: putative polysaccharide deacetylase family protein
 
Burkholderia phymatum STM815

Gene: Bphy_1300: putative polysaccharide deacetylase family protein
 
Burkholderia pseudomallei K96243

Gene: BPSL2118: putative polysaccharide deacetylase family protein
 
Burkholderia sp. 383

Gene: Bcep18194_A5278: putative polysaccharide deacetylase family protein
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1888: putative polysaccharide deacetylase family protein
 
Burkholderia xenovorans LB400

Gene: Bxe_A1926: putative polysaccharide deacetylase family protein
putative polysaccharide deacetylase family protein
uraO
 
Burkholderia cepacia AMMD

Gene: Bamb_1950: Urate oxidase (EC 1.7.3.3)
 
Burkholderia glumae BGR1

Gene: bglu_1g13130: Urate oxidase (EC 1.7.3.3)
 
Burkholderia mallei ATCC 23344

Gene: BMA1507: Urate oxidase (EC 1.7.3.3)
 
Burkholderia phymatum STM815

Gene: Bphy_1299: Urate oxidase (EC 1.7.3.3)
 
Burkholderia pseudomallei K96243

Gene: BPSL2117: Urate oxidase (EC 1.7.3.3)
 
Burkholderia sp. 383

Gene: Bcep18194_A5277: Urate oxidase (EC 1.7.3.3)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1887: Urate oxidase (EC 1.7.3.3)
 
Burkholderia xenovorans LB400

Gene: Bxe_A1927: Urate oxidase (EC 1.7.3.3)
Urate oxidase (EC 1.7.3.3)
allC
 
Burkholderia cepacia AMMD

Gene: Bamb_1949: Allantoicase (EC 3.5.3.4)
 
Burkholderia glumae BGR1

Gene: bglu_1g13140: Allantoicase (EC 3.5.3.4)
 
Burkholderia mallei ATCC 23344

Gene: BMA1505: Allantoicase (EC 3.5.3.4)
 
Burkholderia phymatum STM815

Gene: Bphy_1298: Allantoicase (EC 3.5.3.4)
 
Burkholderia pseudomallei K96243

Gene: BPSL2116: Allantoicase (EC 3.5.3.4)
 
Burkholderia sp. 383

Gene: Bcep18194_A5276: Allantoicase (EC 3.5.3.4)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1886: Allantoicase (EC 3.5.3.4)
 
Burkholderia xenovorans LB400

Gene: Bxe_A1928: Allantoicase (EC 3.5.3.4)
Allantoicase (EC 3.5.3.4)
allA
 
Burkholderia cepacia AMMD

Gene: Bamb_1948: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia glumae BGR1

Gene: bglu_1g13150: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia mallei ATCC 23344

Gene: BMA1504: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia phymatum STM815

Gene: Bphy_1297: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia pseudomallei K96243

Gene: BPSL2115: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia sp. 383

Gene: Bcep18194_A5275: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_1885: Ureidoglycolate hydrolase (EC 3.5.3.19)
 
Burkholderia xenovorans LB400

Gene: Bxe_A1929: Ureidoglycolate hydrolase (EC 3.5.3.19)
Ureidoglycolate hydrolase (EC 3.5.3.19)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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