Statistics of regulated genes

Genome	Genes	Operons
Cupriavidus taiwanensis
Ralstonia eutropha H16	10	5
Ralstonia eutropha JMP134
Ralstonia metallidurans CH34
Ralstonia pickettii 12J	5	1
Ralstonia solanacearum GMI1000	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes							Function
CRON 1.
h16_B2466	Cupriavidus taiwanensis	* Ralstonia eutropha H16 Site: position = -61 score = 5.73127 sequence = ACTGGTCATACCAGT Site: position = -52 score = 4.45923 sequence = ACCAGTATGACCAGA Gene: H16_B2466: ABC-type transporter, periplasmic component: PepT family	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	ABC-type transporter, periplasmic component: PepT family
h16_B2465	Cupriavidus taiwanensis	Ralstonia eutropha H16 Gene: H16_B2465: ABC-type transporter, permease component: PepT family	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	ABC-type transporter, permease component: PepT family
h16_B2464	Cupriavidus taiwanensis	Ralstonia eutropha H16 Gene: H16_B2464: ABC-type transporter, permease component: PepT family	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	ABC-type transporter, permease component: PepT family
h16_B2463	Cupriavidus taiwanensis	Ralstonia eutropha H16 Gene: H16_B2463: ABC-type transporter, duplicated ATPase domains:PepT family	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	ABC-type transporter, duplicated ATPase domains:PepT family
h16_B2462	Cupriavidus taiwanensis	Ralstonia eutropha H16 Gene: H16_B2462: Putative MFS transporter	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Putative MFS transporter
CRON 2.
ureH	Cupriavidus taiwanensis	* Ralstonia eutropha H16 Site: position = -119 score = 3.93347 sequence = ACTGGTCTGATAATT Site: position = -57 score = 5.90588 sequence = ACTGGTCAGACCAGT Gene: H16_B2455: Ureidoglycolate hydrolase (EC 3.5.3.19)	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	Ureidoglycolate hydrolase (EC 3.5.3.19)
dctA	Cupriavidus taiwanensis	Ralstonia eutropha H16 Gene: H16_B2454: C4-dicarboxylate transporter	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	C4-dicarboxylate transporter
CRON 3.
ureR	Cupriavidus taiwanensis	* Ralstonia eutropha H16 Site: position = -119 score = 3.93347 sequence = AATTATCAGACCAGT Site: position = -181 score = 5.90588 sequence = ACTGGTCTGACCAGT Gene: H16_B2456: Transcriptional regulator, GntR family	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	* Ralstonia pickettii 12J Site: position = -41 score = 4.93652 sequence = ACCGGTCAGACCACG Gene: Rpic_0016: Transcriptional regulator, GntR family	* Ralstonia solanacearum GMI1000 Site: position = -41 score = 4.93652 sequence = ACCGGTCAGACCACG Gene: RS01502: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family
ureA	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J Gene: Rpic_0017: amino acid ABC transporter, periplasmic substrate-binding protein	Ralstonia solanacearum GMI1000 Gene: RS01501: amino acid ABC transporter, periplasmic substrate-binding protein	amino acid ABC transporter, periplasmic substrate-binding protein
ureB	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J Gene: Rpic_0018: Amino acid ABC transporter, permease protein	Ralstonia solanacearum GMI1000 Gene: RS01500: Amino acid ABC transporter, permease protein	Amino acid ABC transporter, permease protein
ureC	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J Gene: Rpic_0019: Amino acid ABC transporter, permease protein	Ralstonia solanacearum GMI1000 Gene: RS01499: Amino acid ABC transporter, permease protein	Amino acid ABC transporter, permease protein
ureD	Cupriavidus taiwanensis	Ralstonia eutropha H16	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J Gene: Rpic_0020: Amino acid ABC transporter, ATP-binding protein	Ralstonia solanacearum GMI1000 Gene: RS01498: Amino acid ABC transporter, ATP-binding protein	Amino acid ABC transporter, ATP-binding protein
CRON 4.
aimE	Cupriavidus taiwanensis	* Ralstonia eutropha H16 Site: position = -71 score = 5.73127 sequence = ACTGGTCATACCAGT Gene: H16_B2459: aliphatic amidase	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	aliphatic amidase
CRON 5.
h16_B2458	Cupriavidus taiwanensis	* Ralstonia eutropha H16 Site: position = -41 score = 5.73127 sequence = ACTGGTATGACCAGT Gene: H16_B2458: outer membrane protein (porin)	Ralstonia eutropha JMP134	Ralstonia metallidurans CH34	Ralstonia pickettii 12J	Ralstonia solanacearum GMI1000	outer membrane protein (porin)

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