Regulog TreR - Clostridia-3
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose-6-phosphate |
| Phylum: | Firmicutes |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - GntR/Others
- By effector - Trehalose-6-phosphate
- By pathway - Trehalose utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacteroides pectinophilus ATCC 43243 | ||
| Blautia hansenii DSM 20583 | ||
| Bryantella formatexigens DSM 14469 | ||
| Clostridiales bacterium 1_7_47_FAA | 3 | 1 |
| Clostridium bolteae ATCC BAA-613 | 2 | 1 |
| Clostridium nexile DSM 1787 | ||
| Clostridium scindens ATCC 35704 | ||
| Dorea formicigenerans ATCC 27755 | ||
| Dorea longicatena DSM 13814 | ||
| Eubacterium eligens ATCC 27750 | ||
| Eubacterium rectale ATCC 33656 | ||
| Roseburia intestinalis L1-82 | ||
| Ruminococcus gnavus ATCC 29149 | ||
| Ruminococcus lactaris ATCC 29176 |
| Genes | Function | ||||||||||||||
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| CRON 1. | |||||||||||||||
| treP |
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Clostridiales bacterium 1_7_47_FAA Site: position = -78 score = 5.3334 sequence = AACTTGTTTAAACAAGAT Site: position = -113 score = 5.3334 sequence = AACTTGTTTAAACAAGAT Gene: Cbac1_010100011695: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
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Clostridium bolteae ATCC BAA-613 Site: position = -89 score = 5.3334 sequence = AACTTGTTTAAACAAGAT Site: position = -54 score = 4.92611 sequence = TACTTGTTTAAACAAGAT Gene: CLOBOL_05033: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
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Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) |
| Cbac1_010100011690 |
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Gene: Cbac1_010100011690: hypothetical protein |
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hypothetical protein |
| treA |
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Gene: Cbac1_010100011685: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Gene: CLOBOL_05034: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
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Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |