Regulog TreR - Clostridia-2

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Trehalose utilization
Effector:	Trehalose-6-phosphate
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes				Function

CRON 1.
treR	Clostridium bartlettii DSM 16795	* Clostridium difficile 630 Site: position = -83 score = 4.28492 sequence = TACATGTCTAAACACATT Site: position = -59 score = 4.5485 sequence = AATTTGTTCATATCAGTT Site: position = -296 score = 4.4892 sequence = TATTTGTTTAAACAAATT Gene: CD3090: Trehalose transcriptional repressor, GntR family	Clostridium hiranonis DSM 13275	Trehalose transcriptional repressor, GntR family

CRON 2.
treA	Clostridium bartlettii DSM 16795	* Clostridium difficile 630 Site: position = -52 score = 4.49522 sequence = AATTTGTTTGAACATATT Site: position = -116 score = 4.23155 sequence = TATATGTTTATACAAATA Gene: CD3091: Trehalose-6-phosphate hydrolase (EC 3.2.1.93)	Clostridium hiranonis DSM 13275	Trehalose-6-phosphate hydrolase (EC 3.2.1.93)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --