Regulog SACE_5794 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Actinosynnema mirum DSM 43827
Saccharomonospora viridis DSM 43017
Saccharopolyspora erythraea NRRL 2338	4	4
Acidothermus cellulolyticus 11B
Frankia sp. CcI3
Frankia sp. EAN1pec
Nakamurella multipartita DSM 44233
Nocardioides sp. JS614
Propionibacterium acnes KPA171202

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
Arth_3539	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	* Saccharopolyspora erythraea NRRL 2338 Site: position = -39 score = 5.57017 sequence = CGAACTGTATACAACAAG Gene: SACE_5792: Protein of unknown function DUF2848	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Protein of unknown function DUF2848

CRON 2.
SACE_5794	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	* Saccharopolyspora erythraea NRRL 2338 Site: position = -69 score = 3.87582 sequence = ATGGTTGTATACCAACAA Gene: SACE_5794: Transcriptional regulator, GntR family	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Transcriptional regulator, GntR family

CRON 3.
Arth_3542	Actinosynnema mirum DSM 43827 Gene: Amir_5726: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	Saccharomonospora viridis DSM 43017 Gene: Svir_10860: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	* Saccharopolyspora erythraea NRRL 2338 Site: position = -49 score = 3.87582 sequence = TTGTTGGTATACAACCAT Gene: SACE_5795: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase

CRON 4.
Arth_3540	Actinosynnema mirum DSM 43827	Saccharomonospora viridis DSM 43017	* Saccharopolyspora erythraea NRRL 2338 Site: position = -70 score = 5.57017 sequence = CTTGTTGTATACAGTTCG Gene: SACE_5793: Major facilitator superfamily transporter	Acidothermus cellulolyticus 11B	Frankia sp. CcI3	Frankia sp. EAN1pec	Nakamurella multipartita DSM 44233 Gene: Namu_4803: Major facilitator superfamily transporter	Nocardioides sp. JS614	Propionibacterium acnes KPA171202	Major facilitator superfamily transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SACE_5794 - Frankineae/Propionibacterineae/Pseudonocardiaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --