Regulog SACE_5794 - Frankineae/Propionibacterineae/Pseudonocardiaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Actinobacteria |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - GntR/Others
| Genome | Genes | Operons |
|---|---|---|
| Actinosynnema mirum DSM 43827 | ||
| Saccharomonospora viridis DSM 43017 | ||
| Saccharopolyspora erythraea NRRL 2338 | 4 | 4 |
| Acidothermus cellulolyticus 11B | ||
| Frankia sp. CcI3 | ||
| Frankia sp. EAN1pec | ||
| Nakamurella multipartita DSM 44233 | ||
| Nocardioides sp. JS614 | ||
| Propionibacterium acnes KPA171202 |
| Genes | Function | |||||||||
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| CRON 1. | ||||||||||
| Arth_3539 |
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Saccharopolyspora erythraea NRRL 2338 Site: position = -39 score = 5.57017 sequence = CGAACTGTATACAACAAG Gene: SACE_5792: Protein of unknown function DUF2848 |
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Protein of unknown function DUF2848 |
| CRON 2. | ||||||||||
| SACE_5794 |
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Saccharopolyspora erythraea NRRL 2338 Site: position = -69 score = 3.87582 sequence = ATGGTTGTATACCAACAA Gene: SACE_5794: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| CRON 3. | ||||||||||
| Arth_3542 |
Gene: Amir_5726: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Gene: Svir_10860: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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Saccharopolyspora erythraea NRRL 2338 Site: position = -49 score = 3.87582 sequence = TTGTTGGTATACAACCAT Gene: SACE_5795: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
| CRON 4. | ||||||||||
| Arth_3540 |
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Saccharopolyspora erythraea NRRL 2338 Site: position = -70 score = 5.57017 sequence = CTTGTTGTATACAGTTCG Gene: SACE_5793: Major facilitator superfamily transporter |
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Gene: Namu_4803: Major facilitator superfamily transporter |
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Major facilitator superfamily transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |