Regulog Pden_0318 - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
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| Phylum: | Proteobacteria/Alpha |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - GntR/Others
| Genome | Genes | Operons |
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| Hyphomonas neptunium ATCC 15444 | ||
| Jannaschia sp. CCS1 | ||
| Loktanella vestfoldensis SKA53 | ||
| Oceanicaulis alexandrii HTCC2633 | ||
| Oceanicola batsensis HTCC2597 | ||
| Oceanicola granulosus HTCC2516 | ||
| Paracoccus denitrificans PD1222 | 6 | 2 |
| Rhodobacter sphaeroides 2.4.1 | ||
| Rhodobacterales bacterium HTCC2654 | ||
| Roseobacter sp. MED193 | ||
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | ||
| Silicibacter TM1040 | ||
| Silicibacter pomeroyi DSS-3 | ||
| Sulfitobacter sp. EE-36 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| Pden_0318 |
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Paracoccus denitrificans PD1222 Site: position = -194 score = 4.66076 sequence = AATTGTTGAACAACA Gene: Pden_0318: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| CRON 2. | ||||||||||||||||
| COG1914 |
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Paracoccus denitrificans PD1222 Site: position = -114 score = 4.66076 sequence = TGTTGTTCAACAATT Gene: Pden_0319: Mn2+ and Fe2+ transporters of the NRAMP family |
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Mn2+ and Fe2+ transporters of the NRAMP family |
| COG1540 |
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Gene: Pden_0320: Uncharacterized proteins, homologs of lactam utilization protein B |
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Uncharacterized proteins, homologs of lactam utilization protein B |
| COG4336 |
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Gene: Pden_0321: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
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hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
| alhAB |
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Gene: Pden_0322: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
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Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
| alhC |
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Gene: Pden_0323: Urea carboxylase (EC 6.3.4.6) |
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Urea carboxylase (EC 6.3.4.6) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |