Regulog PMI3555 - Enterobacteriales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Citrobacter koseri ATCC BAA-895
Edwardsiella tarda EIB202
Enterobacter sp. 638
Erwinia carotovora subsp. atroseptica SCRI1043
Escherichia coli str. K-12 substr. MG1655
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Photorhabdus luminescens subsp. laumondii TTO1	7	2
Proteus mirabilis HI4320	5	2
Salmonella typhimurium LT2
Serratia proteamaculans 568
Yersinia pestis KIM
Erwinia amylovora ATCC 49946

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
COG3819	Citrobacter koseri ATCC BAA-895 Gene: CKO_02454: integral membrane protein	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_1217: integral membrane protein	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -248 score = 3.98573 sequence = AATTATCCAACGATG Site: position = -291 score = 4.60595 sequence = TATTGTTCAACAATA Gene: plu4301: integral membrane protein	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_1258: integral membrane protein	Yersinia pestis KIM Gene: y1277: integral membrane protein	Erwinia amylovora ATCC 49946	integral membrane protein
COG3817	Citrobacter koseri ATCC BAA-895 Gene: CKO_02453: integral membrane protein	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_1218: integral membrane protein	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4302: integral membrane protein	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_1259: integral membrane protein	2 Yersinia pestis KIM Gene: y1278: integral membrane protein Gene: y1279: integral membrane protein	Erwinia amylovora ATCC 49946	integral membrane protein
pcp	Citrobacter koseri ATCC BAA-895 Gene: CKO_02452: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Edwardsiella tarda EIB202	Enterobacter sp. 638 Gene: Ent638_1219: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4303: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Proteus mirabilis HI4320	Salmonella typhimurium LT2	Serratia proteamaculans 568 Gene: Spro_1260: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Yersinia pestis KIM Gene: y1280: Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)	Erwinia amylovora ATCC 49946	Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
COG1540	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4304: Uncharacterized proteins, homologs of lactam utilization protein B	Proteus mirabilis HI4320 Gene: PMI3557: Uncharacterized proteins, homologs of lactam utilization protein B	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Erwinia amylovora ATCC 49946	Uncharacterized proteins, homologs of lactam utilization protein B
alhAB	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4305: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Proteus mirabilis HI4320 Gene: PMI3558: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Erwinia amylovora ATCC 49946	Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
alhC	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1 Gene: plu4306: Urea carboxylase (EC 6.3.4.6)	Proteus mirabilis HI4320 Gene: PMI3559: Urea carboxylase (EC 6.3.4.6)	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Erwinia amylovora ATCC 49946	Urea carboxylase (EC 6.3.4.6)
COG1914	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	Photorhabdus luminescens subsp. laumondii TTO1	* Proteus mirabilis HI4320 Site: position = -146 score = 5.54644 sequence = AATTGTTCAACAATC Site: position = -124 score = 3.77764 sequence = TATTGATTAACAATT Gene: PMI3556: Mn2+ and Fe2+ transporters of the NRAMP family	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Erwinia amylovora ATCC 49946	Mn2+ and Fe2+ transporters of the NRAMP family

CRON 2.
PMI3555	Citrobacter koseri ATCC BAA-895	Edwardsiella tarda EIB202	Enterobacter sp. 638	Erwinia carotovora subsp. atroseptica SCRI1043	Escherichia coli str. K-12 substr. MG1655	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	* Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -185 score = 4.60595 sequence = TATTGTTGAACAATA Site: position = -228 score = 3.98573 sequence = CATCGTTGGATAATT Gene: plu4300: Transcriptional regulator, GntR family	* Proteus mirabilis HI4320 Site: position = -359 score = 5.54644 sequence = GATTGTTGAACAATT Site: position = -381 score = 3.77764 sequence = AATTGTTAATCAATA Gene: PMI3555: Transcriptional regulator, GntR family	Salmonella typhimurium LT2	Serratia proteamaculans 568	Yersinia pestis KIM	Erwinia amylovora ATCC 49946	Transcriptional regulator, GntR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog PMI3555 - Enterobacteriales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --