Regulog LldR - Mycobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | ||
| Mycobacterium avium 104 | ||
| Mycobacterium flavescens PYR-GCK | ||
| Mycobacterium leprae TN | ||
| Mycobacterium marinum M | ||
| Mycobacterium smegmatis str. MC2 155 | 4 | 2 |
| Mycobacterium sp. JLS | 4 | 2 |
| Mycobacterium tuberculosis H37Rv | ||
| Mycobacterium vanbaalenii PYR-1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| lldR |
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Mycobacterium smegmatis str. MC2 155 Site: position = -42 score = 6.19742 sequence = TGTGGTCAGACCACA Site: position = -76 score = 6.19742 sequence = TGTGGTCTGACCACA Gene: MSMEG_0596: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
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Mycobacterium sp. JLS Site: position = -23 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = 1 score = 6.005 sequence = TGTGGTCGGACCACA Gene: Mjls_4765: Lactate-responsive regulator LldR in Actinobacteria, GntR family |
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Lactate-responsive regulator LldR in Actinobacteria, GntR family |
| CRON 2. | ||||||||||
| lldE |
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Gene: Mflv_3704: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Mycobacterium smegmatis str. MC2 155 Site: position = -62 score = 6.19742 sequence = TGTGGTCTGACCACA Site: position = -28 score = 6.19742 sequence = TGTGGTCAGACCACA Gene: MSMEG_0595: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Mycobacterium sp. JLS Site: position = -36 score = 6.19742 sequence = TGTGGTCAGACCACA Site: position = -60 score = 6.005 sequence = TGTGGTCCGACCACA Gene: Mjls_4766: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Gene: Mvan_2709: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
| lldF |
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Gene: Mflv_3703: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
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Gene: MSMEG_0594: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Mjls_4767: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
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Gene: Mvan_2710: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| lldG |
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Gene: Mflv_3702: L-lactate dehydrogenase, subunit LldG |
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Gene: MSMEG_0593: L-lactate dehydrogenase, subunit LldG |
Gene: Mjls_4768: L-lactate dehydrogenase, subunit LldG |
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Gene: Mvan_2711: L-lactate dehydrogenase, subunit LldG |
L-lactate dehydrogenase, subunit LldG |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |