Regulog BglR - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Beta-glucosides utilization
Effector:	Beta-glucoside
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 24 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - LacI
By effector - Beta-glucoside
By pathway - Beta-glucosides utilization

Statistics of regulated genes
Genome	Genes	Operons
Shewanella oneidensis MR-1
Shewanella putrefaciens CN-32
Shewanella sp W3-18-1
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella baltica OS155	6	2
Shewanella denitrificans OS217	7	3
Shewanella frigidimarina NCIMB 400	7	3
Shewanella amazonensis SB2B	9	4
Shewanella loihica PV-4
Shewanella pealeana ATCC 700345
Shewanella halifaxensis HAW-EB4
Shewanella piezotolerans WP3	10	4
Shewanella sediminis HAW-EB3
Shewanella woodyi ATCC 51908	7	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
Sden_2610	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	* Shewanella denitrificans OS217 Site: position = -143 score = 6.80819 sequence = TATGTAAGCGCTTACATT Site: position = -304 score = 6.31127 sequence = AAAGAAAGCGCTTACATT Gene: Sden_2610: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Predicted beta-glucoside specific TonB-dependent outer membrane receptor
omp(Bgl)	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155 Gene: Sbal_1125: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Shewanella denitrificans OS217	* Shewanella frigidimarina NCIMB 400 Site: position = -143 score = 6.80819 sequence = TATGTAAGCGCTTACATT Site: position = -304 score = 6.31127 sequence = AAAGAAAGCGCTTACATT Gene: Sfri_1313: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	* Shewanella amazonensis SB2B Site: position = -116 score = 6.80819 sequence = TATGTAAGCGCTTACATT Gene: Sama_1399: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	* Shewanella piezotolerans WP3 Site: position = -63 score = 6.25371 sequence = TTTGTAAGCGCTTACATT Site: position = -108 score = 5.49871 sequence = TGTGTAAGCGCTTACAAA Gene: swp_1631: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Shewanella sediminis HAW-EB3	* Shewanella woodyi ATCC 51908 Site: position = -109 score = 6.45425 sequence = AATGTAAGCGCTTACAAT Gene: Swoo_1144: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Predicted beta-glucoside specific TonB-dependent outer membrane receptor

CRON 2.
bglA1	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	* Shewanella baltica OS155 Site: position = -147 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Gene: Sbal_1131: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	* Shewanella denitrificans OS217 Site: position = -177 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Gene: Sden_2607: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	* Shewanella frigidimarina NCIMB 400 Site: position = -176 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Gene: Sfri_1316: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	* Shewanella amazonensis SB2B Site: position = -134 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Gene: Sama_1402: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	* Shewanella piezotolerans WP3 Site: position = -294 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Site: position = -233 score = 6.86574 sequence = AATGTAAGCGCTTTCATT Gene: swp_1634: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella sediminis HAW-EB3	* Shewanella woodyi ATCC 51908 Site: position = -199 score = 6.35055 sequence = GATGTAAGCGCTTTCATT Gene: Swoo_1147: Cytoplasmic beta-glucosidase (EC 3.2.1.21)	Cytoplasmic beta-glucosidase (EC 3.2.1.21)
bglT	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155 Gene: Sbal_1130: Predicted beta-glucoside transporter, GPH family	Shewanella denitrificans OS217 Gene: Sden_2608: Predicted beta-glucoside transporter, GPH family	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1315: Predicted beta-glucoside transporter, GPH family	Shewanella amazonensis SB2B Gene: Sama_1401: Predicted beta-glucoside transporter, GPH family	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_1633: Predicted beta-glucoside transporter, GPH family	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_1146: Predicted beta-glucoside transporter, GPH family	Predicted beta-glucoside transporter, GPH family
bglR	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155 Gene: Sbal_1129: Transcriptional regulator of beta-glucosides utilization, LacI family	Shewanella denitrificans OS217 Gene: Sden_2609: Transcriptional regulator of beta-glucosides utilization, LacI family	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1314: Transcriptional regulator of beta-glucosides utilization, LacI family	Shewanella amazonensis SB2B Gene: Sama_1400: Transcriptional regulator of beta-glucosides utilization, LacI family	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_1632: Transcriptional regulator of beta-glucosides utilization, LacI family	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_1145: Transcriptional regulator of beta-glucosides utilization, LacI family	Transcriptional regulator of beta-glucosides utilization, LacI family

CRON 3.
bglT2	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	* Shewanella piezotolerans WP3 Site: position = -100 score = 6.45425 sequence = AATGTAAGCGGTTACATT Gene: swp_4298: Sugar:cation symporter family protein	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Sugar:cation symporter family protein
celP	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_4297: Cellobiose phosphorylase	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Cellobiose phosphorylase
gntK	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_4296: Gluconokinase (EC 2.7.1.12)	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Gluconokinase (EC 2.7.1.12)

CRON 4.
lamA	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	* Shewanella amazonensis SB2B Site: position = -97 score = 7.00872 sequence = AATGTAAGCGCTTACATT Gene: Sama_1396: Beta-glucanase precursor (EC 3.2.1.73)	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_4376: Beta-glucanase precursor (EC 3.2.1.73)	Beta-glucanase precursor (EC 3.2.1.73)
omp(Bgl)	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella amazonensis SB2B Gene: Sama_1397: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_4375: Predicted beta-glucoside specific TonB-dependent outer membrane receptor	Predicted beta-glucoside specific TonB-dependent outer membrane receptor

CRON 5.
glcP	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	* Shewanella baltica OS155 Site: position = -138 score = 6.86574 sequence = AATGAAAGCGCTTACATT Gene: Sbal_1132: Predicted glucose transporter in beta-glucoside utilization gene cluster	* Shewanella denitrificans OS217 Site: position = -195 score = 6.86574 sequence = AATGAAAGCGCTTACATT Gene: Sden_2606: Predicted glucose transporter in beta-glucoside utilization gene cluster	* Shewanella frigidimarina NCIMB 400 Site: position = -224 score = 6.86574 sequence = AATGAAAGCGCTTACATT Gene: Sfri_1317: Predicted glucose transporter in beta-glucoside utilization gene cluster	* Shewanella amazonensis SB2B Site: position = -111 score = 6.86574 sequence = AATGAAAGCGCTTACATT Gene: Sama_1403: Predicted glucose transporter in beta-glucoside utilization gene cluster	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	* Shewanella piezotolerans WP3 Site: position = -252 score = 6.86574 sequence = AATGAAAGCGCTTACATT Site: position = -191 score = 6.86574 sequence = AATGAAAGCGCTTACATT Gene: swp_1636: Predicted glucose transporter in beta-glucoside utilization gene cluster	Shewanella sediminis HAW-EB3	* Shewanella woodyi ATCC 51908 Site: position = -127 score = 6.35055 sequence = AATGAAAGCGCTTACATC Gene: Swoo_1148: Predicted glucose transporter in beta-glucoside utilization gene cluster	Predicted glucose transporter in beta-glucoside utilization gene cluster
bglA2	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155 Gene: Sbal_1133: Periplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella denitrificans OS217 Gene: Sden_2605: Periplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1318: Periplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella amazonensis SB2B Gene: Sama_1404: Periplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_1637: Periplasmic beta-glucosidase (EC 3.2.1.21)	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_1149: Periplasmic beta-glucosidase (EC 3.2.1.21)	Periplasmic beta-glucosidase (EC 3.2.1.21)
lamA	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155	Shewanella denitrificans OS217 Gene: Sden_2604: Beta-glucanase precursor (EC 3.2.1.73)	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1319: Beta-glucanase precursor (EC 3.2.1.73)	Shewanella amazonensis SB2B	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3 Gene: swp_1638: Beta-glucanase precursor (EC 3.2.1.73)	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908	Beta-glucanase precursor (EC 3.2.1.73)
glk	Shewanella oneidensis MR-1	Shewanella putrefaciens CN-32	Shewanella sp W3-18-1	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	Shewanella baltica OS155 Gene: Sbal_1134: Glucokinase, ROK family (EC 2.7.1.2)	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400 Gene: Sfri_1321: Glucokinase, ROK family (EC 2.7.1.2)	Shewanella amazonensis SB2B Gene: Sama_1405: Glucokinase, ROK family (EC 2.7.1.2)	Shewanella loihica PV-4	Shewanella pealeana ATCC 700345	Shewanella halifaxensis HAW-EB4	Shewanella piezotolerans WP3	Shewanella sediminis HAW-EB3	Shewanella woodyi ATCC 51908 Gene: Swoo_1150: Glucokinase, ROK family (EC 2.7.1.2)	Glucokinase, ROK family (EC 2.7.1.2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog BglR - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --