Regulog MOCO_RNA_motif - Thermoanaerobacterales

Properties
Regulator type:	RNA regulatory element
Name:	MOCO_RNA_motif
RFAM:	RF01055
Regulation mode:
Biological process:	Molybdopterin biosynthesis; Molybdenum homeostasis
Effector:	Molybdenum
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Thermoanaerobacterales
By RNA motif - MOCO_RNA_motif
By effector - Molybdenum
By pathway - Molybdopterin biosynthesis
By pathway - Molybdenum homeostasis

Statistics of regulated genes
Genome	Genes	Operons
Anaerocellum thermophilum DSM 6725	7	1
Caldicellulosiruptor saccharolyticus DSM 8903	7	1
Carboxydothermus hydrogenoformans Z-2901	4	1
Moorella thermoacetica ATCC 39073	5	2
Thermoanaerobacter ethanolicus X514	9	1
Thermoanaerobacter italicus Ab9
Thermoanaerobacter tengcongensis MB4

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes								Function

CRON 1.
modA	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901	* Moorella thermoacetica ATCC 39073 Site: position = -324 score = 94.4 sequence = ATTGAATAGTCATCT... Gene: Moth_1824: Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)	Thermoanaerobacter ethanolicus X514	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1)
modB	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901	Moorella thermoacetica ATCC 39073 Gene: Moth_1823: Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)	Thermoanaerobacter ethanolicus X514	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901	Moorella thermoacetica ATCC 39073 Gene: Moth_1822: Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)	Thermoanaerobacter ethanolicus X514	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

CRON 2.
tupB	* Anaerocellum thermophilum DSM 6725 Site: position = -235 score = 65.61 sequence = TTTTAGAATCTTTCC... Gene: Athe_0824: ABC-type tungstate transport system, periplasmic binding protein	* Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -216 score = 77.87 sequence = TTTGAAAATCTTTCC... Gene: Csac_0972: ABC-type tungstate transport system, periplasmic binding protein	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0375: ABC-type tungstate transport system, periplasmic binding protein	Moorella thermoacetica ATCC 39073 Gene: Moth_0067: ABC-type tungstate transport system, periplasmic binding protein	* Thermoanaerobacter ethanolicus X514 Site: position = -324 score = 92.06 sequence = GGAGAATAACTCTCC... Gene: Teth514_1386: ABC-type tungstate transport system, periplasmic binding protein	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	ABC-type tungstate transport system, periplasmic binding protein
tupA	Anaerocellum thermophilum DSM 6725 Gene: Athe_0825: ABC-type tungstate transport system, permease protein	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0973: ABC-type tungstate transport system, permease protein	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0376: ABC-type tungstate transport system, permease protein	Moorella thermoacetica ATCC 39073 Gene: Moth_0068: ABC-type tungstate transport system, permease protein	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1387: ABC-type tungstate transport system, permease protein	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	ABC-type tungstate transport system, permease protein
tupC	Anaerocellum thermophilum DSM 6725 Gene: Athe_0826: ABC-type tungstate transport system, ATP-binding protein	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0974: ABC-type tungstate transport system, ATP-binding protein	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0377: ABC-type tungstate transport system, ATP-binding protein	Moorella thermoacetica ATCC 39073 Gene: Moth_0069: ABC-type tungstate transport system, ATP-binding protein	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1388: ABC-type tungstate transport system, ATP-binding protein	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	ABC-type tungstate transport system, ATP-binding protein
moaB	Anaerocellum thermophilum DSM 6725 Gene: Athe_0831: Molybdenum cofactor biosynthesis protein MoaB	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0979: Molybdenum cofactor biosynthesis protein MoaB	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0805: Molybdenum cofactor biosynthesis protein MoaB	Moorella thermoacetica ATCC 39073 Gene: Moth_2132: Molybdenum cofactor biosynthesis protein MoaB	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1389: Molybdenum cofactor biosynthesis protein MoaB	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum cofactor biosynthesis protein MoaB
moeA	Anaerocellum thermophilum DSM 6725 Gene: Athe_0827: Molybdopterin biosynthesis protein MoeA	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0975: Molybdopterin biosynthesis protein MoeA	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0798: Molybdopterin biosynthesis protein MoeA	2 Moorella thermoacetica ATCC 39073 Gene: Moth_2136: Molybdopterin biosynthesis protein MoeA Gene: Moth_2137: Molybdopterin biosynthesis protein MoeA	2 Thermoanaerobacter ethanolicus X514 Gene: Teth514_1390: Molybdopterin biosynthesis protein MoeA Gene: Teth514_1391: Molybdopterin biosynthesis protein MoeA	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdopterin biosynthesis protein MoeA
moaA	Anaerocellum thermophilum DSM 6725 Gene: Athe_0829: Molybdenum cofactor biosynthesis protein MoaA	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0977: Molybdenum cofactor biosynthesis protein MoaA	* Carboxydothermus hydrogenoformans Z-2901 Site: position = -157 score = 84.07 sequence = AAAATAAGCTGCTCC... Gene: CHY_0802: Molybdenum cofactor biosynthesis protein MoaA	Moorella thermoacetica ATCC 39073 Gene: Moth_2135: Molybdenum cofactor biosynthesis protein MoaA	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1392: Molybdenum cofactor biosynthesis protein MoaA	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum cofactor biosynthesis protein MoaA
moaC	Anaerocellum thermophilum DSM 6725 Gene: Athe_0830: Molybdenum cofactor biosynthesis protein MoaC	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0978: Molybdenum cofactor biosynthesis protein MoaC	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0803: Molybdenum cofactor biosynthesis protein MoaC	Moorella thermoacetica ATCC 39073 Gene: Moth_2134: Molybdenum cofactor biosynthesis protein MoaC	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1393: Molybdenum cofactor biosynthesis protein MoaC	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdenum cofactor biosynthesis protein MoaC
mosC	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0804: MOSC domain protein	Moorella thermoacetica ATCC 39073 Gene: Moth_2133: MOSC domain protein	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1394: MOSC domain protein	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	MOSC domain protein
moeA	Anaerocellum thermophilum DSM 6725 Gene: Athe_0828: Molybdopterin biosynthesis protein MoeA	Caldicellulosiruptor saccharolyticus DSM 8903 Gene: Csac_0976: Molybdopterin biosynthesis protein MoeA	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0799: Molybdopterin biosynthesis protein MoeA	Moorella thermoacetica ATCC 39073	Thermoanaerobacter ethanolicus X514	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Molybdopterin biosynthesis protein MoeA

CRON 3.
hydN	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901	* Moorella thermoacetica ATCC 39073 Site: position = -266 score = 19.82 sequence = CCATAAGCGACTTCC... Gene: Moth_0721: Iron-sulfur cluster-binding protein	Thermoanaerobacter ethanolicus X514	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Iron-sulfur cluster-binding protein
aor1	Anaerocellum thermophilum DSM 6725	Caldicellulosiruptor saccharolyticus DSM 8903	Carboxydothermus hydrogenoformans Z-2901 Gene: CHY_0789: Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5)	Moorella thermoacetica ATCC 39073 Gene: Moth_0722: Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5)	Thermoanaerobacter ethanolicus X514 Gene: Teth514_1380: Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5)	Thermoanaerobacter italicus Ab9	Thermoanaerobacter tengcongensis MB4	Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MOCO_RNA_motif - Thermoanaerobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --