Regulog AAur_0050 - Micrococcineae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Micrococcineae
- By TF family - GntR/Others
| Genome | Genes | Operons |
|---|---|---|
| Arthrobacter aurescens TC1 | 5 | 2 |
| Arthrobacter chlorophenolicus A6 | 5 | 2 |
| Arthrobacter sp. FB24 | 7 | 3 |
| Beutenbergia cavernae DSM 12333 | ||
| Brachybacterium faecium DSM 4810 | ||
| Brevibacterium linens BL2 | 1 | 1 |
| Clavibacter michiganensis subsp. michiganensis NCPPB 382 | ||
| Janibacter sp. HTCC2649 | 5 | 2 |
| Jonesia denitrificans DSM 20603 | ||
| Kocuria rhizophila DC2201 | 4 | 1 |
| Kytococcus sedentarius DSM 20547 | 4 | 1 |
| Leifsonia xyli subsp. xyli str. CTCB07 | ||
| Renibacterium salmoninarum ATCC 33209 | ||
| Tropheryma whipplei str. Twist |
| Genes | Function | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||||
| COG1540 |
*
Arthrobacter aurescens TC1 Site: position = -141 score = 5.8149 sequence = GATTGTTGAACAATC Gene: AAur_0051: Uncharacterized proteins, homologs of lactam utilization protein B |
*
Arthrobacter chlorophenolicus A6 Site: position = -67 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Achl_0177: Uncharacterized proteins, homologs of lactam utilization protein B |
*
Arthrobacter sp. FB24 Site: position = -66 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Arth_0093: Uncharacterized proteins, homologs of lactam utilization protein B |
Gene: Bcav_1377: Uncharacterized proteins, homologs of lactam utilization protein B |
Gene: Bfae_29760: Uncharacterized proteins, homologs of lactam utilization protein B |
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Gene: JNB_14193: Uncharacterized proteins, homologs of lactam utilization protein B |
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*
Kocuria rhizophila DC2201 Site: position = -67 score = 5.54644 sequence = GATTGTTGAACAATT Gene: KRH_21120: Uncharacterized proteins, homologs of lactam utilization protein B |
Gene: Ksed_00400: Uncharacterized proteins, homologs of lactam utilization protein B |
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Uncharacterized proteins, homologs of lactam utilization protein B |
| COG2814 |
Gene: AAur_0052: Major facilitator superfamily transporter |
Gene: Achl_0176: Major facilitator superfamily transporter |
*2
Arthrobacter sp. FB24 Gene: Arth_0094: Major facilitator superfamily transporter Site: position = -169 score = 5.77475 sequence = GATTGTTCAACGATC Site: position = -186 score = 4.89538 sequence = GATTGTTCAACAGTT Gene: Arth_3577: Major facilitator superfamily transporter |
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Gene: CMM_0732: Major facilitator superfamily transporter |
*
Janibacter sp. HTCC2649 Site: position = -75 score = 5.08809 sequence = AATTGCTCAACAATC Gene: JNB_14188: Major facilitator superfamily transporter |
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Major facilitator superfamily transporter |
| alhB |
Gene: AAur_0053: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Gene: Arth_0095: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: Bcav_1379: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Gene: CMM_0564: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: JNB_14203: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
|
Gene: KRH_21130: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: Ksed_00380: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
| alhC |
Gene: AAur_0054: Urea carboxylase (EC 6.3.4.6) |
Gene: Achl_0174: Urea carboxylase (EC 6.3.4.6) |
Gene: Arth_0096: Urea carboxylase (EC 6.3.4.6) |
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Gene: BlinB01003516: Urea carboxylase (EC 6.3.4.6) |
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Gene: KRH_21140: Urea carboxylase (EC 6.3.4.6) |
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Urea carboxylase (EC 6.3.4.6) |
| COG1914 |
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Gene: BlinB01003520: Mn2+ and Fe2+ transporters of the NRAMP family |
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Gene: KRH_21180: Mn2+ and Fe2+ transporters of the NRAMP family |
*
Kytococcus sedentarius DSM 20547 Site: position = -77 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Ksed_00410: Mn2+ and Fe2+ transporters of the NRAMP family |
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Mn2+ and Fe2+ transporters of the NRAMP family |
| alhA |
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Gene: Bcav_1378: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Gene: CMM_0563: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
Gene: JNB_14198: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Gene: Ksed_00390: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Gene: RSal33209_3131: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
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Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54) |
| alhAB |
Gene: AAur_0365: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
Gene: Achl_0175: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
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Gene: Bfae_29770: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
Gene: BlinB01003517: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
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Gene: RSal33209_3130: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
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Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54) |
| AAur_0050 |
*
Arthrobacter aurescens TC1 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: AAur_0050: Transcriptional regulator, GntR family |
*
Arthrobacter chlorophenolicus A6 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: Achl_0178: Transcriptional regulator, GntR family |
*
Arthrobacter sp. FB24 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: Arth_0092: Transcriptional regulator, GntR family |
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*
Brevibacterium linens BL2 Site: position = -96 score = 4.59321 sequence = GATTGTTCAACAAGA Site: position = -118 score = 3.88423 sequence = AAGCGTTAGACAATC Gene: BlinB01001258: Transcriptional regulator, GntR family |
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*
Janibacter sp. HTCC2649 Site: position = -66 score = 5.08809 sequence = GATTGTTGAGCAATT Gene: JNB_14183: Transcriptional regulator, GntR family |
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Gene: KRH_21150: Transcriptional regulator, GntR family |
Gene: Ksed_00430: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| COG4336 |
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Gene: Arth_3576: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
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2
Brevibacterium linens BL2 Gene: BlinB01003519: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase Gene: BlinB01003518: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
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2
Kocuria rhizophila DC2201 Gene: KRH_21170: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase Gene: KRH_21160: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
Gene: Ksed_22470: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
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hypothetical protein possibly connected to lactam utilization and allophanate hydrolase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |