Regulog AAur_0050 - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 14 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1	5	2
Arthrobacter chlorophenolicus A6	5	2
Arthrobacter sp. FB24	7	3
Beutenbergia cavernae DSM 12333
Brachybacterium faecium DSM 4810
Brevibacterium linens BL2	1	1
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649	5	2
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201	4	1
Kytococcus sedentarius DSM 20547	4	1
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
COG1540	* Arthrobacter aurescens TC1 Site: position = -141 score = 5.8149 sequence = GATTGTTGAACAATC Gene: AAur_0051: Uncharacterized proteins, homologs of lactam utilization protein B	* Arthrobacter chlorophenolicus A6 Site: position = -67 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Achl_0177: Uncharacterized proteins, homologs of lactam utilization protein B	* Arthrobacter sp. FB24 Site: position = -66 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Arth_0093: Uncharacterized proteins, homologs of lactam utilization protein B	Beutenbergia cavernae DSM 12333 Gene: Bcav_1377: Uncharacterized proteins, homologs of lactam utilization protein B	Brachybacterium faecium DSM 4810 Gene: Bfae_29760: Uncharacterized proteins, homologs of lactam utilization protein B	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_14193: Uncharacterized proteins, homologs of lactam utilization protein B	Jonesia denitrificans DSM 20603	* Kocuria rhizophila DC2201 Site: position = -67 score = 5.54644 sequence = GATTGTTGAACAATT Gene: KRH_21120: Uncharacterized proteins, homologs of lactam utilization protein B	Kytococcus sedentarius DSM 20547 Gene: Ksed_00400: Uncharacterized proteins, homologs of lactam utilization protein B	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Uncharacterized proteins, homologs of lactam utilization protein B
COG2814	Arthrobacter aurescens TC1 Gene: AAur_0052: Major facilitator superfamily transporter	Arthrobacter chlorophenolicus A6 Gene: Achl_0176: Major facilitator superfamily transporter	2 Arthrobacter sp. FB24* Gene: Arth_0094: Major facilitator superfamily transporter Site: position = -169 score = 5.77475 sequence = GATTGTTCAACGATC Site: position = -186 score = 4.89538 sequence = GATTGTTCAACAGTT Gene: Arth_3577: Major facilitator superfamily transporter	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_0732: Major facilitator superfamily transporter	* Janibacter sp. HTCC2649 Site: position = -75 score = 5.08809 sequence = AATTGCTCAACAATC Gene: JNB_14188: Major facilitator superfamily transporter	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Major facilitator superfamily transporter
alhB	Arthrobacter aurescens TC1 Gene: AAur_0053: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_0095: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Beutenbergia cavernae DSM 12333 Gene: Bcav_1379: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_0564: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Janibacter sp. HTCC2649 Gene: JNB_14203: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_21130: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Kytococcus sedentarius DSM 20547 Gene: Ksed_00380: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
alhC	Arthrobacter aurescens TC1 Gene: AAur_0054: Urea carboxylase (EC 6.3.4.6)	Arthrobacter chlorophenolicus A6 Gene: Achl_0174: Urea carboxylase (EC 6.3.4.6)	Arthrobacter sp. FB24 Gene: Arth_0096: Urea carboxylase (EC 6.3.4.6)	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01003516: Urea carboxylase (EC 6.3.4.6)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_21140: Urea carboxylase (EC 6.3.4.6)	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Urea carboxylase (EC 6.3.4.6)
COG1914	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2 Gene: BlinB01003520: Mn2+ and Fe2+ transporters of the NRAMP family	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_21180: Mn2+ and Fe2+ transporters of the NRAMP family	* Kytococcus sedentarius DSM 20547 Site: position = -77 score = 5.8149 sequence = GATTGTTGAACAATC Gene: Ksed_00410: Mn2+ and Fe2+ transporters of the NRAMP family	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Mn2+ and Fe2+ transporters of the NRAMP family
alhA	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333 Gene: Bcav_1378: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382 Gene: CMM_0563: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Janibacter sp. HTCC2649 Gene: JNB_14198: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547 Gene: Ksed_00390: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3131: Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)	Tropheryma whipplei str. Twist	Putative allophanate hydrolase 2, subunit 1 (EC 3.5.1.54)
alhAB	Arthrobacter aurescens TC1 Gene: AAur_0365: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Arthrobacter chlorophenolicus A6 Gene: Achl_0175: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_29770: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Brevibacterium linens BL2 Gene: BlinB01003517: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3130: Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)	Tropheryma whipplei str. Twist	Putative allophanate hydrolase 2, subunits 1 and 2 fusion (EC 3.5.1.54)
AAur_0050	* Arthrobacter aurescens TC1 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: AAur_0050: Transcriptional regulator, GntR family	* Arthrobacter chlorophenolicus A6 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: Achl_0178: Transcriptional regulator, GntR family	* Arthrobacter sp. FB24 Site: position = -55 score = 5.8149 sequence = GATTGTTCAACAATC Gene: Arth_0092: Transcriptional regulator, GntR family	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	* Brevibacterium linens BL2 Site: position = -96 score = 4.59321 sequence = GATTGTTCAACAAGA Site: position = -118 score = 3.88423 sequence = AAGCGTTAGACAATC Gene: BlinB01001258: Transcriptional regulator, GntR family	Clavibacter michiganensis subsp. michiganensis NCPPB 382	* Janibacter sp. HTCC2649 Site: position = -66 score = 5.08809 sequence = GATTGTTGAGCAATT Gene: JNB_14183: Transcriptional regulator, GntR family	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201 Gene: KRH_21150: Transcriptional regulator, GntR family	Kytococcus sedentarius DSM 20547 Gene: Ksed_00430: Transcriptional regulator, GntR family	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Transcriptional regulator, GntR family
COG4336	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_3576: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	2 Brevibacterium linens BL2 Gene: BlinB01003519: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase Gene: BlinB01003518: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	2 Kocuria rhizophila DC2201 Gene: KRH_21170: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase Gene: KRH_21160: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	Kytococcus sedentarius DSM 20547 Gene: Ksed_22470: hypothetical protein possibly connected to lactam utilization and allophanate hydrolase	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	hypothetical protein possibly connected to lactam utilization and allophanate hydrolase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog AAur_0050 - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --