Regulog Znr - Mycobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | |
| Biological process: | Zinc homeostasis |
| Effector: | Zinc ion, (Zn2+) |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By TF family - ArsR
- By effector - Zinc ion, (Zn2+)
- By pathway - Zinc homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | ||
| Mycobacterium avium 104 | 2 | 1 |
| Mycobacterium flavescens PYR-GCK | 4 | 2 |
| Mycobacterium leprae TN | 2 | 1 |
| Mycobacterium marinum M | 2 | 1 |
| Mycobacterium smegmatis str. MC2 155 | 2 | 1 |
| Mycobacterium sp. JLS | 2 | 1 |
| Mycobacterium tuberculosis H37Rv | 2 | 1 |
| Mycobacterium vanbaalenii PYR-1 | 4 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| zocA |
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*2
Mycobacterium flavescens PYR-GCK Gene: Mflv_2822: Zinc transporting ATPase (EC 3.6.3.3) Site: position = -1 score = 5.26885 sequence = CATGCGTATTATTGCATG Gene: Mflv_5337: Zinc transporting ATPase (EC 3.6.3.3) |
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Mycobacterium vanbaalenii PYR-1 Site: position = -1 score = 5.26885 sequence = CATGCGTATTATTGCATG Gene: Mvan_3700: Zinc transporting ATPase (EC 3.6.3.3) |
Zinc transporting ATPase (EC 3.6.3.3) |
| cyaZ |
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2
Mycobacterium flavescens PYR-GCK Gene: Mflv_5336: Adenylate cyclase (EC 4.6.1.1) Gene: Mflv_2823: Adenylate cyclase (EC 4.6.1.1) |
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Gene: Mvan_3699: Adenylate cyclase (EC 4.6.1.1) |
Adenylate cyclase (EC 4.6.1.1) |
| CRON 2. | ||||||||||
| znr |
Gene: MAB_1679c: Zinc homeostasis transcriptional regulator Znr, ArsR family |
*
Mycobacterium avium 104 Site: position = -101 score = 6.22312 sequence = CATGCGTCATCATGCATG Gene: MAV_2037: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium flavescens PYR-GCK Site: position = -11 score = 5.66829 sequence = CATGCACGGGCGTGCATG Gene: Mflv_2718: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium leprae TN Site: position = -80 score = 6.07746 sequence = CATGCGCCATCACGCATG Gene: ML0825: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium marinum M Site: position = -104 score = 6.26717 sequence = CATGCATCATCATGCATG Gene: MMAR_3668: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium smegmatis str. MC2 155 Site: position = -50 score = 4.98448 sequence = CATGCGAATCAGCGCATG Gene: MSMEG_4486: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium sp. JLS Site: position = -34 score = 5.36633 sequence = CATGCGAATCGATGCATG Gene: Mjls_3457: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium tuberculosis H37Rv Site: position = -81 score = 6.26717 sequence = CATGCATCATCATGCATG Gene: Rv2358: Zinc homeostasis transcriptional regulator Znr, ArsR family |
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Mycobacterium vanbaalenii PYR-1 Site: position = -32 score = 6.06368 sequence = CATGCACGGTCACGCATG Gene: Mvan_3819: Zinc homeostasis transcriptional regulator Znr, ArsR family |
Zinc homeostasis transcriptional regulator Znr, ArsR family |
| zur |
Gene: MAB_1678c: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: MAV_2036: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: Mflv_2717: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: ML0824: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: MMAR_3669: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: MSMEG_4487: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: Mjls_3458: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: Rv2359: Zinc homeostasis transcriptional regulator Zur, Fur family |
Gene: Mvan_3820: Zinc homeostasis transcriptional regulator Zur, Fur family |
Zinc homeostasis transcriptional regulator Zur, Fur family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |