Regulog HpdR - Chloroflexia
| Regulator type: | Transcription factor |
| Regulator family: | TrmB |
| Regulation mode: | repressor |
| Biological process: | Tyrosine degradation |
| Effector: | |
| Phylum: | Chloroflexi |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By TF family - TrmB
- By pathway - Tyrosine degradation
| Genome | Genes | Operons |
|---|---|---|
| Chloroflexus aggregans DSM 9485 | 2 | 1 |
| Chloroflexus sp. Y-400-fl | 2 | 1 |
| Herpetosiphon aurantiacus ATCC 23779 | 2 | 1 |
| Roseiflexus castenholzii DSM 13941 | ||
| Roseiflexus sp. RS-1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| hpdR |
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Chloroflexus aggregans DSM 9485 Site: position = -36 score = 6.78745 sequence = CACCACTGATAAGTGGTA Gene: Cagg_2745: Predicted transcriptional regulator of tyrosine catabolism, TrmB family |
*
Chloroflexus sp. Y-400-fl Site: position = -63 score = 6.98388 sequence = CACCACTGATAAGTGGTG Gene: Chy400_0871: Predicted transcriptional regulator of tyrosine catabolism, TrmB family |
*
Herpetosiphon aurantiacus ATCC 23779 Site: position = -24 score = 6.19813 sequence = CACCACTAGGCAGTGGTG Gene: Haur_2763: Predicted transcriptional regulator of tyrosine catabolism, TrmB family |
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Predicted transcriptional regulator of tyrosine catabolism, TrmB family |
| hpd |
Gene: Cagg_2744: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
Gene: Chy400_0872: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
Gene: Haur_2764: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
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4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |