Regulog HpdR - Chloroflexia

Properties
Regulator type:	Transcription factor
Regulator family:	TrmB
Regulation mode:	repressor
Biological process:	Tyrosine degradation
Effector:
Phylum:	Chloroflexi
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Chloroflexus aggregans DSM 9485	2	1
Chloroflexus sp. Y-400-fl	2	1
Herpetosiphon aurantiacus ATCC 23779	2	1
Roseiflexus castenholzii DSM 13941
Roseiflexus sp. RS-1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes						Function

CRON 1.
hpdR	* Chloroflexus aggregans DSM 9485 Site: position = -36 score = 6.78745 sequence = CACCACTGATAAGTGGTA Gene: Cagg_2745: Predicted transcriptional regulator of tyrosine catabolism, TrmB family	* Chloroflexus sp. Y-400-fl Site: position = -63 score = 6.98388 sequence = CACCACTGATAAGTGGTG Gene: Chy400_0871: Predicted transcriptional regulator of tyrosine catabolism, TrmB family	* Herpetosiphon aurantiacus ATCC 23779 Site: position = -24 score = 6.19813 sequence = CACCACTAGGCAGTGGTG Gene: Haur_2763: Predicted transcriptional regulator of tyrosine catabolism, TrmB family	Roseiflexus castenholzii DSM 13941	Roseiflexus sp. RS-1	Predicted transcriptional regulator of tyrosine catabolism, TrmB family
hpd	Chloroflexus aggregans DSM 9485 Gene: Cagg_2744: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	Chloroflexus sp. Y-400-fl Gene: Chy400_0872: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	Herpetosiphon aurantiacus ATCC 23779 Gene: Haur_2764: 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)	Roseiflexus castenholzii DSM 13941	Roseiflexus sp. RS-1	4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --