Regulog Caur_1779 - Chloroflexia
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Energy metabolism |
| Effector: | |
| Phylum: | Chloroflexi |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Chloroflexi
- By TF family - LysR
- By pathway - Energy metabolism
| Genome | Genes | Operons |
|---|---|---|
| Chloroflexus aggregans DSM 9485 | 4 | 2 |
| Chloroflexus sp. Y-400-fl | 3 | 2 |
| Herpetosiphon aurantiacus ATCC 23779 | ||
| Roseiflexus castenholzii DSM 13941 | ||
| Roseiflexus sp. RS-1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| nuoL |
*
Chloroflexus aggregans DSM 9485 Site: position = -120 score = 6.10301 sequence = TGTTCTTTTAAAACGAACA Gene: Cagg_2889: NADH-quinone oxidoreductase |
*
Chloroflexus sp. Y-400-fl Site: position = -106 score = 5.98987 sequence = CGTTCTTCTTAGTAGAACG Gene: Chy400_1925: NADH-quinone oxidoreductase |
|
Gene: Rcas_0566: NADH-quinone oxidoreductase |
Gene: RoseRS_3854: NADH-quinone oxidoreductase |
NADH-quinone oxidoreductase |
| Cagg_2890 |
Gene: Cagg_2890: hypothetical protein |
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hypothetical protein |
| PF10070 |
Gene: Cagg_2891: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase |
Gene: Chy400_1924: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase |
|
Gene: Rcas_0567: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase |
Gene: RoseRS_3853: Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase |
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase |
| CRON 2. | ||||||
| Caur_1779 |
*
Chloroflexus aggregans DSM 9485 Site: position = -104 score = 6.10301 sequence = TGTTCGTTTTAAAAGAACA Gene: Cagg_2888: Putative transcriptional regulator of NADH dehydrogenase, LysR family |
*
Chloroflexus sp. Y-400-fl Site: position = -317 score = 5.98987 sequence = CGTTCTACTAAGAAGAACG Gene: Chy400_1926: Putative transcriptional regulator of NADH dehydrogenase, LysR family |
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Putative transcriptional regulator of NADH dehydrogenase, LysR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |