Regulog IolR - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Inositol utilization
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By TF family - LacI
By pathway - Inositol utilization

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1	10	2
Arthrobacter chlorophenolicus A6	7	4
Arthrobacter sp. FB24
Beutenbergia cavernae DSM 12333
Brachybacterium faecium DSM 4810
Brevibacterium linens BL2
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
iolR	* Arthrobacter aurescens TC1 Site: position = -91 score = 6.42979 sequence = ATTTTGTAGCGCTACAATTT Gene: AAur_1987: Transcriptional regulator for inositol utilization, LacI family	* Arthrobacter chlorophenolicus A6 Site: position = -66 score = 5.60022 sequence = TGTTTGGAGCGCTCCATAAA Gene: Achl_0116: Transcriptional regulator for inositol utilization, LacI family	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Transcriptional regulator for inositol utilization, LacI family
inoC	Arthrobacter aurescens TC1 Gene: AAur_1988: Predicted inositol ABC transport system, sugar-binding protein	* Arthrobacter chlorophenolicus A6 Site: position = -104 score = 5.67965 sequence = TTCATGGAGCGCTCCAAATG Gene: Achl_0113: Predicted inositol ABC transport system, sugar-binding protein	Arthrobacter sp. FB24 Gene: Arth_0830: Predicted inositol ABC transport system, sugar-binding protein	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3164: Predicted inositol ABC transport system, sugar-binding protein	Tropheryma whipplei str. Twist	Predicted inositol ABC transport system, sugar-binding protein
inoB	Arthrobacter aurescens TC1 Gene: AAur_1989: Predicted inositol ABC transport system, permease protein	Arthrobacter chlorophenolicus A6 Gene: Achl_0114: Predicted inositol ABC transport system, permease protein	Arthrobacter sp. FB24 Gene: Arth_0831: Predicted inositol ABC transport system, permease protein	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3163: Predicted inositol ABC transport system, permease protein	Tropheryma whipplei str. Twist	Predicted inositol ABC transport system, permease protein
inoC	Arthrobacter aurescens TC1 Gene: AAur_1990: Predicted inositol ABC transport system, ATP-binding protein	Arthrobacter chlorophenolicus A6 Gene: Achl_0115: Predicted inositol ABC transport system, ATP-binding protein	Arthrobacter sp. FB24 Gene: Arth_0832: Predicted inositol ABC transport system, ATP-binding protein	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3162: Predicted inositol ABC transport system, ATP-binding protein	Tropheryma whipplei str. Twist	Predicted inositol ABC transport system, ATP-binding protein
iolG1	Arthrobacter aurescens TC1 Gene: AAur_1992: putative myo-inositol 2-dehydrogenase	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_26160: putative myo-inositol 2-dehydrogenase	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_03620: putative myo-inositol 2-dehydrogenase	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative myo-inositol 2-dehydrogenase
iolG2	Arthrobacter aurescens TC1 Gene: AAur_1993: putative myo-inositol 2-dehydrogenase	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_0833: putative myo-inositol 2-dehydrogenase	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative myo-inositol 2-dehydrogenase
iolG3	Arthrobacter aurescens TC1 Gene: AAur_1994: putative myo-inositol 2-dehydrogenase	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24 Gene: Arth_0834: putative myo-inositol 2-dehydrogenase	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_3165: putative myo-inositol 2-dehydrogenase	Tropheryma whipplei str. Twist	putative myo-inositol 2-dehydrogenase
iolG4	* Arthrobacter aurescens TC1 Site: position = 44 score = 6.42979 sequence = AAATTGTAGCGCTACAAAAT Gene: AAur_1986: putative myo-inositol 2-dehydrogenase	* Arthrobacter chlorophenolicus A6 Site: position = -90 score = 5.60022 sequence = TTTATGGAGCGCTCCAAACA Gene: Achl_0117: putative myo-inositol 2-dehydrogenase	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative myo-inositol 2-dehydrogenase
iolE	Arthrobacter aurescens TC1 Gene: AAur_1985: Inosose dehydratase (EC 4.2.1.44)	Arthrobacter chlorophenolicus A6 Gene: Achl_0119: Inosose dehydratase (EC 4.2.1.44)	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Inosose dehydratase (EC 4.2.1.44)
iolG5	Arthrobacter aurescens TC1 Gene: AAur_1984: putative myo-inositol 2-dehydrogenase	* Arthrobacter chlorophenolicus A6 Site: position = -18 score = 6.18191 sequence = TTATTGGAGCGCTCCATAAT Gene: Achl_0112: putative myo-inositol 2-dehydrogenase	Arthrobacter sp. FB24 Gene: Arth_1058: putative myo-inositol 2-dehydrogenase	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative myo-inositol 2-dehydrogenase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog IolR - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --