Regulog SusR4 - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	activator
Biological process:	Polysaccharides utilization
Effector:
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By pathway - Polysaccharides utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228
Bacteroides dorei DSM 17855
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483	4	1
Bacteroides plebeius DSM 17135
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	4	1
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
BT2159	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -206 score = 5.49233 sequence = ATCTACATTTTTT Site: position = -139 score = 5.49233 sequence = ATCTACATAAAGT Gene: BACOVA_03187: Predicted dehydrogenase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482* Gene: BT4449: Predicted dehydrogenase Site: position = -135 score = 5.49233 sequence = ATCTACATAAAGT Site: position = -202 score = 5.49233 sequence = ATCTACATTTTTT Gene: BT2159: Predicted dehydrogenase	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00953: Predicted dehydrogenase	Bacteroides vulgatus ATCC 8482	Predicted dehydrogenase
BT2158	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03188: Predicted dehydrogenase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482 Gene: BT4448: Predicted dehydrogenase Gene: BT2158: Predicted dehydrogenase	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00952: Predicted dehydrogenase	Bacteroides vulgatus ATCC 8482	Predicted dehydrogenase
BT2157	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03189: Predicted secreted glycosyl hydrolase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482 Gene: BT2157: Predicted secreted glycosyl hydrolase Gene: BT4447: Predicted secreted glycosyl hydrolase	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00951: Predicted secreted glycosyl hydrolase	Bacteroides vulgatus ATCC 8482	Predicted secreted glycosyl hydrolase
BT2156	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03190: Predicted sugar phosphate isomerase/epimerase	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	2 Bacteroides thetaiotaomicron VPI-5482 Gene: BT2156: Predicted sugar phosphate isomerase/epimerase Gene: BT4446: Predicted sugar phosphate isomerase/epimerase	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00950: Predicted sugar phosphate isomerase/epimerase	Bacteroides vulgatus ATCC 8482	Predicted sugar phosphate isomerase/epimerase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SusR4 - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --