Regulog SusR3 - Bacteroidaceae
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | |
| Biological process: | Polysaccharides utilization |
| Effector: | |
| Phylum: | Bacteroidetes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - [Other]
- By pathway - Polysaccharides utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | ||
| Bacteroides coprophilus DSM 18228 | ||
| Bacteroides dorei DSM 17855 | ||
| Bacteroides eggerthii DSM 20697 | ||
| Bacteroides fragilis NCTC 9343 | ||
| Bacteroides ovatus ATCC 8483 | 5 | 1 |
| Bacteroides plebeius DSM 17135 | ||
| Bacteroides stercoris ATCC 43183 | ||
| Bacteroides thetaiotaomicron VPI-5482 | 5 | 1 |
| Bacteroides uniformis ATCC 8492 | ||
| Bacteroides vulgatus ATCC 8482 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| susC3 |
Gene: BACCELL_02361: SusC3, outer membrane protein involved in polysaccharides binding |
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Bacteroides ovatus ATCC 8483 Site: position = -194 score = 5.43398 sequence = AACCACTTTTTTGGATAT Site: position = -127 score = 5.93839 sequence = ATCCACTTATTGACCCCT Gene: BACOVA_00942: SusC3, outer membrane protein involved in polysaccharides binding |
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Bacteroides thetaiotaomicron VPI-5482 Site: position = -127 score = 6.06779 sequence = ATCCACTTATTATACCCT Site: position = -194 score = 5.98591 sequence = ATCCACTTTTTAGGCCTC Gene: BT3310: SusC3, outer membrane protein involved in polysaccharides binding |
Gene: BACUNI_00152: SusC3, outer membrane protein involved in polysaccharides binding |
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SusC3, outer membrane protein involved in polysaccharides binding |
| susD3 |
Gene: BACCELL_02362: SusD3, outer membrane protein |
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Gene: BACOVA_00943: SusD3, outer membrane protein |
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Gene: BT3311: SusD3, outer membrane protein |
Gene: BACUNI_00151: SusD3, outer membrane protein |
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SusD3, outer membrane protein |
| PF02055 |
Gene: BACCELL_01652: Predicted O-glycosyl hydrolase |
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Gene: BACOVA_00944: Predicted O-glycosyl hydrolase |
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Gene: BT3312: Predicted O-glycosyl hydrolase |
Gene: BACUNI_00150: Predicted O-glycosyl hydrolase |
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Predicted O-glycosyl hydrolase |
| BT3313 |
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Gene: BACOVA_00945: Conserved hypothetical protein |
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Gene: BT3313: Conserved hypothetical protein |
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Conserved hypothetical protein |
| bglB |
Gene: BACCELL_01677: Predicted thermostable beta-glucosidase B |
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Gene: BACOVA_00946: Predicted thermostable beta-glucosidase B |
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Gene: BT3314: Predicted thermostable beta-glucosidase B |
Gene: BACUNI_01042: Predicted thermostable beta-glucosidase B |
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Predicted thermostable beta-glucosidase B |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |