Regulog GntR1 - Streptococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - RpiR
- By effector - Gluconate
- By pathway - Gluconate utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactococcus lactis subsp. cremoris SK11 | 5 | 3 |
| Lactococcus lactis subsp. lactis Il1403 | 5 | 3 |
| Streptococcus agalactiae 2603V/R | ||
| Streptococcus dysgalactiae subsp. equisimilis GGS_124 | ||
| Streptococcus equi subsp. zooepidemicus MGCS10565 | ||
| Streptococcus gallolyticus UCN34 | ||
| Streptococcus gordonii str. Challis substr. CH1 | ||
| Streptococcus mitis B6 | ||
| Streptococcus mutans UA159 | ||
| Streptococcus pneumoniae TIGR4 | ||
| Streptococcus pyogenes M1 GAS | ||
| Streptococcus sanguinis SK36 | ||
| Streptococcus suis 05ZYH33 | ||
| Streptococcus thermophilus CNRZ1066 | ||
| Streptococcus uberis 0140J |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| gntZ2 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -98 score = 5.74815 sequence = TATGTAAAACATTTACACA Gene: LACR_0642: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -97 score = 5.89109 sequence = CATGTAAAATATTTACATA Gene: L0046: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
| CRON 2. | ||||||||||||||||
| gntR1 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -291 score = 5.63732 sequence = TTTGTAAAATATTTTCTGA Gene: LACR_2498: Gluconate utilization transcriptional regulator GntR, RpiR family |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -287 score = 5.63732 sequence = TTTGTAAAATATTTTCTGA Gene: L54944: Gluconate utilization transcriptional regulator GntR, RpiR family |
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Gluconate utilization transcriptional regulator GntR, RpiR family |
| ywhA |
Gene: LACR_2499: hypothetical protein |
Gene: L55836: hypothetical protein |
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hypothetical protein |
| CRON 3. | ||||||||||||||||
| gntZ1 |
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Lactococcus lactis subsp. cremoris SK11 Site: position = -96 score = 5.63732 sequence = TCAGAAAATATTTTACAAA Gene: LACR_2497: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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Lactococcus lactis subsp. lactis Il1403 Site: position = -92 score = 5.63732 sequence = TCAGAAAATATTTTACAAA Gene: L53699: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
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6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) |
| gntK |
Gene: LACR_2496: Gluconokinase (EC 2.7.1.12) |
Gene: L52019: Gluconokinase (EC 2.7.1.12) |
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Gluconokinase (EC 2.7.1.12) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |