Regulog SusR - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	[Other]
Regulation mode:	repressor
Biological process:	Starch utilization
Effector:
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 18 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By TF family - [Other]
By pathway - Starch utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838
Bacteroides coprophilus DSM 18228	4	1
Bacteroides dorei DSM 17855	12	2
Bacteroides eggerthii DSM 20697
Bacteroides fragilis NCTC 9343
Bacteroides ovatus ATCC 8483	6	2
Bacteroides plebeius DSM 17135	5	2
Bacteroides stercoris ATCC 43183
Bacteroides thetaiotaomicron VPI-5482	7	2
Bacteroides uniformis ATCC 8492
Bacteroides vulgatus ATCC 8482	4	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
susC	2 Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_05446: SusC, outer membrane protein involved in starch binding Gene: BACCELL_01427: SusC, outer membrane protein involved in starch binding	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_01926: SusC, outer membrane protein involved in starch binding	4 Bacteroides dorei DSM 17855* Site: position = -193 score = 5.57646 sequence = CATTTATATTTTTT Site: position = -116 score = 5.77376 sequence = CATTTATATTTTTA Gene: BACDOR_02280: SusC, outer membrane protein involved in starch binding Gene: BACDOR_02279: SusC, outer membrane protein involved in starch binding Gene: BACDOR_02278: SusC, outer membrane protein involved in starch binding Gene: BACDOR_02284: SusC, outer membrane protein involved in starch binding	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03518: SusC, outer membrane protein involved in starch binding	Bacteroides plebeius DSM 17135 Gene: BACPLE_02370: SusC, outer membrane protein involved in starch binding	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3702: SusC, outer membrane protein involved in starch binding	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -214 score = 5.30475 sequence = CTTTTATATTTTTA Gene: BVU_1380: SusC, outer membrane protein involved in starch binding	SusC, outer membrane protein involved in starch binding
susD	2 Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_05445: SusD, outer membrane protein Gene: BACCELL_01428: SusD, outer membrane protein	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_01927: SusD, outer membrane protein	2 Bacteroides dorei DSM 17855 Gene: BACDOR_02282: SusD, outer membrane protein Gene: BACDOR_02277: SusD, outer membrane protein	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03517: SusD, outer membrane protein	Bacteroides plebeius DSM 17135 Gene: BACPLE_02369: SusD, outer membrane protein	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3701: SusD, outer membrane protein	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1379: SusD, outer membrane protein	SusD, outer membrane protein
susE	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_05444: Outer membrane protein SusE	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_02276: Outer membrane protein SusE	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03516: Outer membrane protein SusE	Bacteroides plebeius DSM 17135 Gene: BACPLE_02368: Outer membrane protein SusE	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3700: Outer membrane protein SusE	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Outer membrane protein SusE
susF	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_05443: Outer membrane protein SusF	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_02275: Outer membrane protein SusF	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03515: Outer membrane protein SusF	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3699: Outer membrane protein SusF	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Outer membrane protein SusF
susG	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_02274: Alpha-amylase SusG (EC 3.2.1.1)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3698: Alpha-amylase SusG (EC 3.2.1.1)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Alpha-amylase SusG (EC 3.2.1.1)
susB	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_01925: Alpha-glucosidase SusB (EC 3.2.1.20)	Bacteroides dorei DSM 17855 Gene: BACDOR_02285: Alpha-glucosidase SusB (EC 3.2.1.20)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -184 score = 5.05251 sequence = GACTTATATTTATC Site: position = -117 score = 5.23892 sequence = AACTTGTATTTTTA Gene: BACOVA_03519: Alpha-glucosidase SusB (EC 3.2.1.20)	* Bacteroides plebeius DSM 17135 Site: position = -109 score = 5.24407 sequence = GATTTATATTTTCC Gene: BACPLE_02371: Alpha-glucosidase SusB (EC 3.2.1.20)	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -184 score = 5.10164 sequence = AACTTATATTTATC Site: position = -117 score = 5.23892 sequence = AACTTGTATTTTTA Gene: BT3703: Alpha-glucosidase SusB (EC 3.2.1.20)	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482 Gene: BVU_1381: Alpha-glucosidase SusB (EC 3.2.1.20)	Alpha-glucosidase SusB (EC 3.2.1.20)
susA	Bacteroides cellulosilyticus DSM 14838	* Bacteroides coprophilus DSM 18228 Site: position = -88 score = 5.58735 sequence = AATTTATATTTTTA Gene: BACCOPRO_01924: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	* Bacteroides dorei DSM 17855 Site: position = -167 score = 5.18221 sequence = CGTTTATATTTTCA Site: position = -100 score = 5.77376 sequence = CATTTATATTTTTA Gene: BACDOR_02286: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	* Bacteroides ovatus ATCC 8483 Site: position = -163 score = 5.34975 sequence = CACTTGTATTTTTC Gene: BACOVA_03520: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	* Bacteroides plebeius DSM 17135 Site: position = -148 score = 5.08284 sequence = CATTTATATTTTAG Site: position = -82 score = 4.8473 sequence = TATTTATATTTTAT Gene: BACPLE_02372: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	Bacteroides stercoris ATCC 43183	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -163 score = 5.34975 sequence = CACTTGTATTTTTC Site: position = -96 score = 5.35788 sequence = CATTTATATTTTCT Gene: BT3704: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	Bacteroides uniformis ATCC 8492	* Bacteroides vulgatus ATCC 8482 Site: position = -167 score = 5.18221 sequence = CGTTTATATTTTCA Site: position = -100 score = 5.77376 sequence = CATTTATATTTTTA Gene: BVU_1382: Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)	Alpha-amylase (Neopullulanase) SusA (EC 3.2.1.135)
BACDOR_02283	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855 Gene: BACDOR_02283: Hypothetical protein	Bacteroides eggerthii DSM 20697	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	Hypothetical protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SusR - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --