Regulog YbfI - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:
Biological process:	Drug resistance
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - AraC
By pathway - Drug resistance

Statistics of regulated genes
Genome	Genes	Operons
Anoxybacillus flavithermus WK1
Bacillus amyloliquefaciens FZB42
Bacillus cereus ATCC 14579
Bacillus clausii KSM-K16	3	1
Bacillus halodurans C-125
Bacillus licheniformis DSM 13	4	1
Bacillus pumilus SAFR-032
Bacillus subtilis subsp. subtilis str. 168	2	1
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ybfI	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	* Bacillus clausii KSM-K16 Site: position = -71 score = 7.31988 sequence = TCAATATCT-(1)-ACAAGAGCG Gene: ABC0246: Transcriptional regulator, AraC family	Bacillus halodurans C-125	2 Bacillus licheniformis DSM 13* Site: position = -69 score = 7.17701 sequence = GCAACATCA-(1)-ACAAGAAAT Gene: BLi00253: Transcriptional regulator, AraC family Gene: BLi00252: Transcriptional regulator, AraC family	Bacillus pumilus SAFR-032	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -75 score = 7.17701 sequence = GCAACATCA-(1)-ACAAGAAAT Gene: BSU02220: Transcriptional regulator, AraC family	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator, AraC family
ybfH	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579 Gene: BC0318: Permease of the drug/metabolite transporter (DMT) superfamily	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13 Gene: BLi00251: Permease of the drug/metabolite transporter (DMT) superfamily	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU02210: Permease of the drug/metabolite transporter (DMT) superfamily	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Permease of the drug/metabolite transporter (DMT) superfamily
BLi00250	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16	Bacillus halodurans C-125	Bacillus licheniformis DSM 13 Gene: BLi00250: Hypothetical protein	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hypothetical protein
PF01619	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC0247: Predicted proline dehydrogenase (EC 1.5.99.8)	Bacillus halodurans C-125 Gene: BH1939: Predicted proline dehydrogenase (EC 1.5.99.8)	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_4091: Predicted proline dehydrogenase (EC 1.5.99.8)	Predicted proline dehydrogenase (EC 1.5.99.8)
ABC0248	Anoxybacillus flavithermus WK1	Bacillus amyloliquefaciens FZB42	Bacillus cereus ATCC 14579	Bacillus clausii KSM-K16 Gene: ABC0248: Beta-lactamase	Bacillus halodurans C-125	Bacillus licheniformis DSM 13	Bacillus pumilus SAFR-032	Bacillus subtilis subsp. subtilis str. 168	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Beta-lactamase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog YbfI - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --