Regulog ArgR - Bacteroidaceae

Properties
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor
Biological process:	Arginine biosynthesis
Effector:	Arginine
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 11 sites [see more]

Member of regulog collections

By taxonomy - Bacteroidaceae
By trascription factor - ArgR
By TF family - ArgR
By effector - Arginine
By pathway - Arginine biosynthesis

Statistics of regulated genes
Genome	Genes	Operons
Bacteroides cellulosilyticus DSM 14838	6	1
Bacteroides coprophilus DSM 18228	5	1
Bacteroides dorei DSM 17855	5	1
Bacteroides eggerthii DSM 20697	7	1
Bacteroides fragilis NCTC 9343	5	1
Bacteroides ovatus ATCC 8483	5	1
Bacteroides plebeius DSM 17135	5	1
Bacteroides stercoris ATCC 43183	6	1
Bacteroides thetaiotaomicron VPI-5482	5	1
Bacteroides uniformis ATCC 8492	6	1
Bacteroides vulgatus ATCC 8482	5	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
argR	* Bacteroides cellulosilyticus DSM 14838 Site: position = -21 score = 6.08257 sequence = TTAGAATAATTATACAGA Gene: BACCELL_01193: Arginine regulatory protein ArgR	* Bacteroides coprophilus DSM 18228 Site: position = -16 score = 5.46657 sequence = CAAGAATAATTATACAAT Gene: BACCOPRO_03285: Arginine regulatory protein ArgR	* Bacteroides dorei DSM 17855 Site: position = -18 score = 5.75433 sequence = TTAGAATAATTATGCAGT Gene: BACDOR_01176: Arginine regulatory protein ArgR	* Bacteroides eggerthii DSM 20697 Site: position = -21 score = 5.89774 sequence = TAAGAATAATTATACAGA Gene: BACEGG_03661: Arginine regulatory protein ArgR	* Bacteroides fragilis NCTC 9343 Site: position = -18 score = 5.77567 sequence = TTAGAATAATTATACAAG Gene: BF0483: Arginine regulatory protein ArgR	* Bacteroides ovatus ATCC 8483 Site: position = -16 score = 6.01547 sequence = TTAGAATAATTATACAAT Gene: BACOVA_03592: Arginine regulatory protein ArgR	* Bacteroides plebeius DSM 17135 Site: position = -16 score = 5.70636 sequence = AAAGAATAATTATACAAT Gene: BACPLE_03785: Arginine regulatory protein ArgR	* Bacteroides stercoris ATCC 43183 Site: position = -21 score = 5.89774 sequence = TAAGAATAATTATACAGA Gene: BACSTE_00373: Arginine regulatory protein ArgR	* Bacteroides thetaiotaomicron VPI-5482 Site: position = -16 score = 6.01547 sequence = TTAGAATAATTATACAAT Gene: BT3762: Arginine regulatory protein ArgR	* Bacteroides uniformis ATCC 8492 Site: position = -20 score = 6.08257 sequence = TTAGAATAATTATACAGA Gene: BACUNI_00423: Arginine regulatory protein ArgR	* Bacteroides vulgatus ATCC 8482 Site: position = -18 score = 5.69716 sequence = TCAGAATAATTATGCAGT Gene: BVU_0594: Arginine regulatory protein ArgR	Arginine regulatory protein ArgR
argA2	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01194: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03286: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides dorei DSM 17855 Gene: BACDOR_01177: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03660: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides fragilis NCTC 9343 Gene: BF0482: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03591: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides plebeius DSM 17135 Gene: BACPLE_03784: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00374: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3761: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00424: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Bacteroides vulgatus ATCC 8482 Gene: BVU_0593: Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)	Predicted N-succinyl-L-glutamate synthase (EC 2.3.1.-)
argG	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01195: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03287: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides dorei DSM 17855 Gene: BACDOR_01178: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03659: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides fragilis NCTC 9343 Gene: BF0481: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03590: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides plebeius DSM 17135 Gene: BACPLE_03783: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00375: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3760: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00425: Argininosuccinate synthase (EC 6.3.4.5)	Bacteroides vulgatus ATCC 8482 Gene: BVU_0592: Argininosuccinate synthase (EC 6.3.4.5)	Argininosuccinate synthase (EC 6.3.4.5)
BACCELL_01196	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01196: hypothetical protein	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03658: hypothetical protein	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00376: hypothetical protein	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00426: hypothetical protein	Bacteroides vulgatus ATCC 8482	hypothetical protein
argC	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01197: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03288: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides dorei DSM 17855 Gene: BACDOR_01179: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03657: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides fragilis NCTC 9343 Gene: BF0480: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03589: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides plebeius DSM 17135 Gene: BACPLE_03782: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00377: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3759: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00427: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	Bacteroides vulgatus ATCC 8482 Gene: BVU_0591: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)	N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
BACEGG_03656	Bacteroides cellulosilyticus DSM 14838	Bacteroides coprophilus DSM 18228	Bacteroides dorei DSM 17855	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03656: hypothetical protein	Bacteroides fragilis NCTC 9343	Bacteroides ovatus ATCC 8483	Bacteroides plebeius DSM 17135	Bacteroides stercoris ATCC 43183	Bacteroides thetaiotaomicron VPI-5482	Bacteroides uniformis ATCC 8492	Bacteroides vulgatus ATCC 8482	hypothetical protein
argD	Bacteroides cellulosilyticus DSM 14838 Gene: BACCELL_01198: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides coprophilus DSM 18228 Gene: BACCOPRO_03289: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides dorei DSM 17855 Gene: BACDOR_01180: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides eggerthii DSM 20697 Gene: BACEGG_03655: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides fragilis NCTC 9343 Gene: BF0479: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides ovatus ATCC 8483 Gene: BACOVA_03588: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides plebeius DSM 17135 Gene: BACPLE_03781: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides stercoris ATCC 43183 Gene: BACSTE_00378: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides thetaiotaomicron VPI-5482 Gene: BT3758: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides uniformis ATCC 8492 Gene: BACUNI_00428: Acetylornithine aminotransferase (EC 2.6.1.11)	Bacteroides vulgatus ATCC 8482 Gene: BVU_0590: Acetylornithine aminotransferase (EC 2.6.1.11)	Acetylornithine aminotransferase (EC 2.6.1.11)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ArgR - Bacteroidaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --