Regulog UxuR - Bacteroidaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Phylum: | Bacteroidetes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacteroidaceae
- By TF family - LacI
- By effector - Glucuronate
- By pathway - Glucuronate utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacteroides cellulosilyticus DSM 14838 | ||
| Bacteroides coprophilus DSM 18228 | ||
| Bacteroides dorei DSM 17855 | ||
| Bacteroides eggerthii DSM 20697 | ||
| Bacteroides fragilis NCTC 9343 | ||
| Bacteroides ovatus ATCC 8483 | 3 | 1 |
| Bacteroides plebeius DSM 17135 | 3 | 1 |
| Bacteroides stercoris ATCC 43183 | ||
| Bacteroides thetaiotaomicron VPI-5482 | 3 | 1 |
| Bacteroides uniformis ATCC 8492 | ||
| Bacteroides vulgatus ATCC 8482 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| uxuR |
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Bacteroides ovatus ATCC 8483 Site: position = -79 score = 5.62319 sequence = TGTGTGTGCGCACACACT Gene: BACOVA_00860: Predicted transcriptional regulator for glucuronate catabolism, LacI family |
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Bacteroides plebeius DSM 17135 Site: position = -35 score = 5.64746 sequence = TGCGTGTTCGCACACACG Gene: BACPLE_03706: Predicted transcriptional regulator for glucuronate catabolism, LacI family |
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Bacteroides thetaiotaomicron VPI-5482 Site: position = -124 score = 5.45269 sequence = CGTGTGTGCGCACACACT Gene: BT1434: Predicted transcriptional regulator for glucuronate catabolism, LacI family |
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Predicted transcriptional regulator for glucuronate catabolism, LacI family |
| uxuB |
Gene: BACCELL_01659: D-mannonate oxidoreductase (EC 1.1.1.57) |
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Gene: BACDOR_02114: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BACEGG_03381: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BF0143: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BACOVA_00859: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BACPLE_03707: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BACSTE_02444: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BT1433: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BACUNI_01039: D-mannonate oxidoreductase (EC 1.1.1.57) |
Gene: BVU_1261: D-mannonate oxidoreductase (EC 1.1.1.57) |
D-mannonate oxidoreductase (EC 1.1.1.57) |
| uxuA |
Gene: BACCELL_01660: Mannonate dehydratase (EC 4.2.1.8) |
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Gene: BACDOR_02115: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BACEGG_03380: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BF0142: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BACOVA_00858: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BACPLE_03708: Mannonate dehydratase (EC 4.2.1.8) |
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Gene: BT1432: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BACUNI_01040: Mannonate dehydratase (EC 4.2.1.8) |
Gene: BVU_1262: Mannonate dehydratase (EC 4.2.1.8) |
Mannonate dehydratase (EC 4.2.1.8) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |