Regulog Rcas_2304 - Chloroflexia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Amino acid utilization
Effector:
Phylum:	Chloroflexi
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Chloroflexus aggregans DSM 9485
Chloroflexus sp. Y-400-fl
Herpetosiphon aurantiacus ATCC 23779
Roseiflexus castenholzii DSM 13941	3	1
Roseiflexus sp. RS-1	3	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes						Function

CRON 1.
Rcas_2304	Chloroflexus aggregans DSM 9485	Chloroflexus sp. Y-400-fl	Herpetosiphon aurantiacus ATCC 23779	* Roseiflexus castenholzii DSM 13941 Site: position = -71 score = 6.6239 sequence = AGAAATTATAAAAATTTCC Gene: Rcas_2304: Transcriptional regulator, GntR family	* Roseiflexus sp. RS-1 Site: position = -228 score = 6.43059 sequence = AGAAATTATAAAAATCTCC Gene: RoseRS_1545: Transcriptional regulator, GntR family	Transcriptional regulator, GntR family
Rcas_2303	Chloroflexus aggregans DSM 9485	Chloroflexus sp. Y-400-fl	Herpetosiphon aurantiacus ATCC 23779	Roseiflexus castenholzii DSM 13941 Gene: Rcas_2303: Putative branched-chain amino acid transporter substrate-binding protein	Roseiflexus sp. RS-1 Gene: RoseRS_1544: Putative branched-chain amino acid transporter substrate-binding protein	Putative branched-chain amino acid transporter substrate-binding protein
Rcas_2302	Chloroflexus aggregans DSM 9485	Chloroflexus sp. Y-400-fl	Herpetosiphon aurantiacus ATCC 23779	Roseiflexus castenholzii DSM 13941 Gene: Rcas_2302: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	Roseiflexus sp. RS-1 Gene: RoseRS_1543: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)	High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --