Regulog yybP-ykoY - Caulobacterales
| Regulator type: | RNA regulatory element |
| Name: | yybP-ykoY |
| RFAM: | RF00080 |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Caulobacterales
- By RNA motif - yybP-ykoY
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 1 | 1 |
| Caulobacter segnis ATCC 21756 | 1 | 1 |
| Caulobacter sp. K31 | 1 | 1 |
| Phenylobacterium zucineum HLK1 | 1 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| COG2119 |
*
Caulobacter crescentus CB15 Site: position = -148 score = 56.88 sequence = GCCGCCCACCTTTGG... Gene: CC2370: Probable transmembrane protein |
*
Caulobacter segnis ATCC 21756 Site: position = -198 score = 50.66 sequence = GCGCCCCACCTTTGG... Gene: Cseg_3164: Probable transmembrane protein |
*
Caulobacter sp. K31 Site: position = -220 score = 45.17 sequence = CCCGCTCACCTTTGG... Gene: Caul_3626: Probable transmembrane protein |
*
Phenylobacterium zucineum HLK1 Site: position = -193 score = 33.37 sequence = GCGGGCCTTCTACGG... Gene: PHZ_c1810: Probable transmembrane protein |
Probable transmembrane protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |