Regulog serC - Caulobacterales
| Regulator type: | RNA regulatory element |
| Name: | serC |
| RFAM: | RF00517 |
| Regulation mode: | |
| Biological process: | Serine biosynthesis |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Caulobacterales
- By RNA motif - serC
- By pathway - Serine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Caulobacter crescentus CB15 | 2 | 1 |
| Caulobacter segnis ATCC 21756 | 2 | 1 |
| Caulobacter sp. K31 | 2 | 1 |
| Phenylobacterium zucineum HLK1 | 2 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| serC |
*
Caulobacter crescentus CB15 Site: position = -60 score = 52.54 sequence = CCGGCGGGCCACGCC... Gene: CC3216: Phosphoserine aminotransferase (EC 2.6.1.52) |
*
Caulobacter segnis ATCC 21756 Site: position = -58 score = 49.02 sequence = GGCGGGCCACGCCCT... Gene: Cseg_0704: Phosphoserine aminotransferase (EC 2.6.1.52) |
*
Caulobacter sp. K31 Site: position = -60 score = 52.61 sequence = CCGGCGGGCCACGCC... Gene: Caul_4468: Phosphoserine aminotransferase (EC 2.6.1.52) |
*
Phenylobacterium zucineum HLK1 Site: position = -45 score = 47.11 sequence = CCGGCGGGCCACGCC... Gene: PHZ_c3273: Phosphoserine aminotransferase (EC 2.6.1.52) |
Phosphoserine aminotransferase (EC 2.6.1.52) |
| serA |
Gene: CC3215: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: Cseg_0705: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: Caul_4467: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Gene: PHZ_c3272: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |