Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog serC - Caulobacterales

Properties
Regulator type: RNA regulatory element
Name: serC
RFAM: RF00517
Regulation mode:
Biological process: Serine biosynthesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Caulobacter crescentus CB15 2 1
Caulobacter segnis ATCC 21756 2 1
Caulobacter sp. K31 2 1
Phenylobacterium zucineum HLK1 2 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
serC
*
Caulobacter crescentus CB15

Site:
position = -60
score = 52.54
sequence = CCGGCGGGCCACGCC...

Gene: CC3216: Phosphoserine aminotransferase (EC 2.6.1.52)
*
Caulobacter segnis ATCC 21756

Site:
position = -58
score = 49.02
sequence = GGCGGGCCACGCCCT...

Gene: Cseg_0704: Phosphoserine aminotransferase (EC 2.6.1.52)
*
Caulobacter sp. K31

Site:
position = -60
score = 52.61
sequence = CCGGCGGGCCACGCC...

Gene: Caul_4468: Phosphoserine aminotransferase (EC 2.6.1.52)
*
Phenylobacterium zucineum HLK1

Site:
position = -45
score = 47.11
sequence = CCGGCGGGCCACGCC...

Gene: PHZ_c3273: Phosphoserine aminotransferase (EC 2.6.1.52)
Phosphoserine aminotransferase (EC 2.6.1.52)
serA
 
Caulobacter crescentus CB15

Gene: CC3215: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Caulobacter segnis ATCC 21756

Gene: Cseg_0705: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Caulobacter sp. K31

Gene: Caul_4467: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
 
Phenylobacterium zucineum HLK1

Gene: PHZ_c3272: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD