Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog S15 - Pasteurellales

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 2 2
Aggregatibacter aphrophilus NJ8700 1 1
Pasteurella multocida subsp. multocida str. Pm70 1 1
Mannheimia succiniciproducens MBEL55E 1 1
Actinobacillus succinogenes 130Z 1 1
Haemophilus somnus 2336 1 1
Actinobacillus pleuropneumoniae serovar 7 str. AP76 1 1
Haemophilus ducreyi 35000HP 1 1
Haemophilus parasuis SH0165 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rpsO
*2
Haemophilus influenzae Rd KW20

Site:
position = -63
score = 102.42
sequence = GTCATCGCTGAGTTA...

Gene: HI1328: SSU ribosomal protein S15p (S13e)

Site:
position = -61
score = 78.29
sequence = CACTTCCGTCATAAA...

Gene: HI1468: SSU ribosomal protein S15p (S13e)
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -63
score = 94.73
sequence = GTCGTCGCTGAATTA...

Gene: NT05HA_2369: SSU ribosomal protein S15p (S13e)
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -63
score = 101.93
sequence = GTCGTAGCTGGATTA...

Gene: PM0301: SSU ribosomal protein S15p (S13e)
*
Mannheimia succiniciproducens MBEL55E

Site:
position = -63
score = 109.79
sequence = GTCGTAGCTGAATTA...

Gene: MS0699: SSU ribosomal protein S15p (S13e)
*
Actinobacillus succinogenes 130Z

Site:
position = -63
score = 105.06
sequence = ATCGTCGCTGAATTA...

Gene: Asuc_1812: SSU ribosomal protein S15p (S13e)
*
Haemophilus somnus 2336

Site:
position = -66
score = 85.23
sequence = CTGTCATCGCTGAGT...

Gene: HSM_0776: SSU ribosomal protein S15p (S13e)
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -66
score = 93.11
sequence = GTCCTAGCTGAGTTA...

Gene: APP7_1062: SSU ribosomal protein S15p (S13e)
*
Haemophilus ducreyi 35000HP

Site:
position = -63
score = 85.13
sequence = GTCATAGCTGAGTTA...

Gene: HD1738: SSU ribosomal protein S15p (S13e)
*
Haemophilus parasuis SH0165

Site:
position = -67
score = 105.69
sequence = GTGTCGTAGCTGAAT...

Gene: HAPS_1131: SSU ribosomal protein S15p (S13e)
SSU ribosomal protein S15p (S13e)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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