Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PreQ1 - Pasteurellales

Properties
Regulator type: RNA regulatory element
Name: PreQ1
RFAM: RF00522
Regulation mode:
Biological process: Queuosine biosynthesis
Effector: Pre-queuosine1
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Haemophilus influenzae Rd KW20 3 1
Aggregatibacter aphrophilus NJ8700 3 2
Pasteurella multocida subsp. multocida str. Pm70 3 1
Mannheimia succiniciproducens MBEL55E 3 1
Actinobacillus succinogenes 130Z 3 1
Haemophilus somnus 2336
Actinobacillus pleuropneumoniae serovar 7 str. AP76 3 1
Haemophilus ducreyi 35000HP 3 1
Haemophilus parasuis SH0165 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
queC
*
Haemophilus influenzae Rd KW20

Site:
position = -47
score = 41.98
sequence = ACCCCCCGTAGTTCG...

Gene: HI1191: Queuosine Biosynthesis QueC ATPase
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -47
score = 48.81
sequence = CATCTGTGGTTCGCA...

Gene: NT05HA_0238: Queuosine Biosynthesis QueC ATPase
*
Pasteurella multocida subsp. multocida str. Pm70

Site:
position = -70
score = 41.8
sequence = TTTCATAGTGGTTCG...

Gene: PM0186: Queuosine Biosynthesis QueC ATPase
*
Mannheimia succiniciproducens MBEL55E

Site:
position = 41
score = 54.97
sequence = AATTCGTGGTTCGAA...

Gene: MS1855: Queuosine Biosynthesis QueC ATPase
*
Actinobacillus succinogenes 130Z

Site:
position = -46
score = 55.14
sequence = TCATCGTGGTTCGCA...

Gene: Asuc_2017: Queuosine Biosynthesis QueC ATPase
 
Haemophilus somnus 2336
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Site:
position = -64
score = 33.4
sequence = CACTCGTGGTTCGAA...

Gene: APP7_1153: Queuosine Biosynthesis QueC ATPase
*
Haemophilus ducreyi 35000HP

Site:
position = -65
score = 18.25
sequence = TCGTGGTTCGAAAAC...

Gene: HD0558: Queuosine Biosynthesis QueC ATPase
*
Haemophilus parasuis SH0165

Site:
position = -49
score = 46.42
sequence = TTCAACCGTGGTTCG...

Gene: HAPS_1387: Queuosine Biosynthesis QueC ATPase
Queuosine Biosynthesis QueC ATPase
queD
 
Haemophilus influenzae Rd KW20

Gene: HI1190: Queuosine biosynthesis QueD, PTPS-I
*
Aggregatibacter aphrophilus NJ8700

Site:
position = -149
score = 40.3
sequence = TCAATTTGTAGTTCG...

Gene: NT05HA_0382: Queuosine biosynthesis QueD, PTPS-I
 
Pasteurella multocida subsp. multocida str. Pm70

Gene: PM0185: Queuosine biosynthesis QueD, PTPS-I
 
Mannheimia succiniciproducens MBEL55E

Gene: MS1856: Queuosine biosynthesis QueD, PTPS-I
 
Actinobacillus succinogenes 130Z

Gene: Asuc_2018: Queuosine biosynthesis QueD, PTPS-I
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Gene: APP7_1154: Queuosine biosynthesis QueD, PTPS-I
 
Haemophilus ducreyi 35000HP

Gene: HD0557: Queuosine biosynthesis QueD, PTPS-I
 
Haemophilus parasuis SH0165

Gene: HAPS_1386: Queuosine biosynthesis QueD, PTPS-I
Queuosine biosynthesis QueD, PTPS-I
queE
 
Haemophilus influenzae Rd KW20

Gene: HI1189: Queuosine Biosynthesis QueE Radical SAM
 
Aggregatibacter aphrophilus NJ8700

Gene: NT05HA_0381: Queuosine Biosynthesis QueE Radical SAM
 
Pasteurella multocida subsp. multocida str. Pm70

Gene: PM0184: Queuosine Biosynthesis QueE Radical SAM
 
Mannheimia succiniciproducens MBEL55E

Gene: MS1857: Queuosine Biosynthesis QueE Radical SAM
 
Actinobacillus succinogenes 130Z

Gene: Asuc_2019: Queuosine Biosynthesis QueE Radical SAM
 
Haemophilus somnus 2336
 
Actinobacillus pleuropneumoniae serovar 7 str. AP76

Gene: APP7_1155: Queuosine Biosynthesis QueE Radical SAM
 
Haemophilus ducreyi 35000HP

Gene: HD0556: Queuosine Biosynthesis QueE Radical SAM
 
Haemophilus parasuis SH0165

Gene: HAPS_1385: Queuosine Biosynthesis QueE Radical SAM
Queuosine Biosynthesis QueE Radical SAM
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD