Regulog Lysine - Pasteurellales
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Pasteurellales
- By RNA motif - Lysine
- By effector - Lysine
- By pathway - Lysine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 1 | 1 |
| Aggregatibacter aphrophilus NJ8700 | 1 | 1 |
| Pasteurella multocida subsp. multocida str. Pm70 | 1 | 1 |
| Mannheimia succiniciproducens MBEL55E | 1 | 1 |
| Actinobacillus succinogenes 130Z | ||
| Haemophilus somnus 2336 | 1 | 1 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | 2 | 2 |
| Haemophilus ducreyi 35000HP | 2 | 2 |
| Haemophilus parasuis SH0165 | 1 | 1 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| lysW |
*
Haemophilus influenzae Rd KW20 Site: position = -196 score = 127.69 sequence = CTACAAAAGTAGAGG... Gene: HI1586: Predicted lysine transporter, NhaC family |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -272 score = 136.77 sequence = ACGTATGTAGAGGTG... Gene: NT05HA_0885: Predicted lysine transporter, NhaC family |
*
Pasteurella multocida subsp. multocida str. Pm70 Site: position = -266 score = 131.56 sequence = CTACTTGTGTAGAGG... Gene: PM0871: Predicted lysine transporter, NhaC family |
*
Mannheimia succiniciproducens MBEL55E Site: position = -267 score = 134.01 sequence = CTACACATGTAGAGG... Gene: MS1321: Predicted lysine transporter, NhaC family |
Gene: Asuc_1038: Predicted lysine transporter, NhaC family |
*
Haemophilus somnus 2336 Site: position = -258 score = 134.05 sequence = ACATATGTAGAGGTG... Gene: HSM_1255: Predicted lysine transporter, NhaC family |
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -296 score = 138.3 sequence = CAAATCGTAGAGGTG... Gene: APP7_0526: Predicted lysine transporter, NhaC family |
*
Haemophilus ducreyi 35000HP Site: position = -102 score = 135.12 sequence = CAAATTGTAGAGGTG... Gene: HD1227: Predicted lysine transporter, NhaC family |
*
Haemophilus parasuis SH0165 Site: position = -297 score = 138.45 sequence = CAAATTGTAGAGGTG... Gene: HAPS_1122: Predicted lysine transporter, NhaC family |
Predicted lysine transporter, NhaC family |
| CRON 2. | ||||||||||
| lysC |
Gene: HI1632: Aspartokinase (EC 2.7.2.4) |
Gene: NT05HA_1404: Aspartokinase (EC 2.7.2.4) |
Gene: PM0937: Aspartokinase (EC 2.7.2.4) |
Gene: MS1613: Aspartokinase (EC 2.7.2.4) |
Gene: Asuc_0925: Aspartokinase (EC 2.7.2.4) |
|
*
Actinobacillus pleuropneumoniae serovar 7 str. AP76 Site: position = -279 score = 57.21 sequence = ATTGCGGGAGAGGCG... Gene: APP7_0752: Aspartokinase (EC 2.7.2.4) |
*
Haemophilus ducreyi 35000HP Site: position = -296 score = 51.58 sequence = TCATTGCGGGAGAGG... Gene: HD1375: Aspartokinase (EC 2.7.2.4) |
|
Aspartokinase (EC 2.7.2.4) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |