Regulog L10_leader - Pasteurellales
| Regulator type: | RNA regulatory element |
| Name: | L10_leader |
| RFAM: | RF00557 |
| Regulation mode: | |
| Biological process: | Ribosome biogenesis |
| Effector: | |
| Phylum: | Proteobacteria |
Member of regulog collections
- By taxonomy - Pasteurellales
- By RNA motif - L10_leader
- By pathway - Ribosome biogenesis
| Genome | Genes | Operons |
|---|---|---|
| Haemophilus influenzae Rd KW20 | 2 | 1 |
| Aggregatibacter aphrophilus NJ8700 | 2 | 1 |
| Pasteurella multocida subsp. multocida str. Pm70 | ||
| Mannheimia succiniciproducens MBEL55E | ||
| Actinobacillus succinogenes 130Z | ||
| Haemophilus somnus 2336 | 2 | 1 |
| Actinobacillus pleuropneumoniae serovar 7 str. AP76 | ||
| Haemophilus ducreyi 35000HP | ||
| Haemophilus parasuis SH0165 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| rplJ |
*
Haemophilus influenzae Rd KW20 Site: position = -169 score = 21.08 sequence = GACCTATTCAAGCCC... Gene: HI0640: LSU ribosomal protein L10p (P0) |
*
Aggregatibacter aphrophilus NJ8700 Site: position = -173 score = 20.94 sequence = TGACCTCATTCAAGC... Gene: NT05HA_1815: LSU ribosomal protein L10p (P0) |
Gene: PM1739: LSU ribosomal protein L10p (P0) |
Gene: MS0209: LSU ribosomal protein L10p (P0) |
Gene: Asuc_0043: LSU ribosomal protein L10p (P0) |
*
Haemophilus somnus 2336 Site: position = -194 score = 20.08 sequence = TGACCTCTCAAGCCC... Gene: HSM_0038: LSU ribosomal protein L10p (P0) |
Gene: APP7_1780: LSU ribosomal protein L10p (P0) |
Gene: HD1881: LSU ribosomal protein L10p (P0) |
Gene: HAPS_1411: LSU ribosomal protein L10p (P0) |
LSU ribosomal protein L10p (P0) |
| rplL |
Gene: HI0641: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: NT05HA_1814: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: PM1738: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: MS0210: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: Asuc_0042: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: HSM_0039: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: APP7_1781: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: HD1879: LSU ribosomal protein L7/L12 (P1/P2) |
Gene: HAPS_1410: LSU ribosomal protein L7/L12 (P1/P2) |
LSU ribosomal protein L7/L12 (P1/P2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |