Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Thr_leader - Vibrionales

Properties
Regulator type: RNA regulatory element
Name: Thr_leader
RFAM: RF00506
Regulation mode:
Biological process: Threonine biosynthesis
Effector:
Phylum: Proteobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Vibrio cholerae O1 biovar eltor str. N16961 3 1
Vibrio vulnificus CMCP6 3 1
Vibrio harveyi ATCC BAA-1116 3 1
Vibrio parahaemolyticus RIMD 2210633 3 1
Vibrio shilonii AK1 3 1
Vibrio splendidus LGP32 3 1
Vibrio fischeri ES114 3 1
Vibrio salmonicida LFI1238 3 1
Vibrio angustum S14 3 1
Photobacterium profundum SS9 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
thrA
*
Vibrio cholerae O1 biovar eltor str. N16961

Site:
position = -150
score = 79.23
sequence = AGCCTAATCGTAATG...

Gene: VC2364: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio vulnificus CMCP6

Site:
position = -154
score = 66.75
sequence = AGCCAACTAGTAATG...

Gene: VV1_0545: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio harveyi ATCC BAA-1116

Site:
position = -172
score = 61.06
sequence = CCAAGTAGTAATGAC...

Gene: VIBHAR_00939: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -173
score = 68.44
sequence = CCTAGTAGTAATGAC...

Gene: VP0494: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio shilonii AK1

Site:
position = -144
score = 64.26
sequence = CGTAGTAATGACCAC...

Gene: VSAK1_14022: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio splendidus LGP32

Site:
position = -147
score = 67.95
sequence = CCACCTAGTAATGAC...

Gene: VS_0483: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio fischeri ES114

Site:
position = -232
score = 55.17
sequence = ATTATCAGCTCTATG...

Gene: VF_2118: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio salmonicida LFI1238

Site:
position = -229
score = 51.01
sequence = ATTATCAGCTCAATG...

Gene: VSAL_I2556: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Vibrio angustum S14

Site:
position = -192
score = 41.12
sequence = CACGCCATTACACGC...

Gene: VAS14_07699: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
*
Photobacterium profundum SS9

Site:
position = -211
score = 76.36
sequence = TATCAGCACAACCAC...

Gene: PBPRA0552: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
thrB
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2363: Homoserine kinase (EC 2.7.1.39)
 
Vibrio vulnificus CMCP6

Gene: VV1_0544: Homoserine kinase (EC 2.7.1.39)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00940: Homoserine kinase (EC 2.7.1.39)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP0495: Homoserine kinase (EC 2.7.1.39)
 
Vibrio shilonii AK1

Gene: VSAK1_14027: Homoserine kinase (EC 2.7.1.39)
 
Vibrio splendidus LGP32

Gene: VS_0484: Homoserine kinase (EC 2.7.1.39)
 
Vibrio fischeri ES114

Gene: VF_2117: Homoserine kinase (EC 2.7.1.39)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2555: Homoserine kinase (EC 2.7.1.39)
 
Vibrio angustum S14

Gene: VAS14_07694: Homoserine kinase (EC 2.7.1.39)
 
Photobacterium profundum SS9

Gene: PBPRA0553: Homoserine kinase (EC 2.7.1.39)
Homoserine kinase (EC 2.7.1.39)
thrC
 
Vibrio cholerae O1 biovar eltor str. N16961

Gene: VC2362: Threonine synthase (EC 4.2.3.1)
 
Vibrio vulnificus CMCP6

Gene: VV1_0543: Threonine synthase (EC 4.2.3.1)
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_00941: Threonine synthase (EC 4.2.3.1)
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VP0496: Threonine synthase (EC 4.2.3.1)
 
Vibrio shilonii AK1

Gene: VSAK1_14032: Threonine synthase (EC 4.2.3.1)
 
Vibrio splendidus LGP32

Gene: VS_0485: Threonine synthase (EC 4.2.3.1)
 
Vibrio fischeri ES114

Gene: VF_2116: Threonine synthase (EC 4.2.3.1)
 
Vibrio salmonicida LFI1238

Gene: VSAL_I2554: Threonine synthase (EC 4.2.3.1)
 
Vibrio angustum S14

Gene: VAS14_07689: Threonine synthase (EC 4.2.3.1)
 
Photobacterium profundum SS9

Gene: PBPRA0554: Threonine synthase (EC 4.2.3.1)
Threonine synthase (EC 4.2.3.1)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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