Regulog L10_leader - Vibrionales

Properties
Regulator type:	RNA regulatory element
Name:	L10_leader
RFAM:	RF00557
Regulation mode:
Biological process:	Ribosome biogenesis
Effector:
Phylum:	Proteobacteria

Member of regulog collections

By taxonomy - Vibrionales
By RNA motif - L10_leader
By pathway - Ribosome biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio vulnificus CMCP6
Vibrio harveyi ATCC BAA-1116
Vibrio parahaemolyticus RIMD 2210633
Vibrio shilonii AK1
Vibrio splendidus LGP32	2	1
Vibrio fischeri ES114	2	1
Vibrio salmonicida LFI1238	2	1
Vibrio angustum S14
Photobacterium profundum SS9

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
rplJ	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC0326: LSU ribosomal protein L10p (P0)	Vibrio vulnificus CMCP6 Gene: VV1_1209: LSU ribosomal protein L10p (P0)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_00227: LSU ribosomal protein L10p (P0)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2924: LSU ribosomal protein L10p (P0)	Vibrio shilonii AK1	* Vibrio splendidus LGP32 Site: position = -139 score = 25.33 sequence = AGCAATTCAGGTCAT... Gene: VS_2965: LSU ribosomal protein L10p (P0)	* Vibrio fischeri ES114 Site: position = -288 score = 24.18 sequence = TTTAATTAGGAAGTC... Gene: VF_2416: LSU ribosomal protein L10p (P0)	* Vibrio salmonicida LFI1238 Site: position = -178 score = 20.51 sequence = TTTGATTAAATAGTC... Gene: VSAL_I2868: LSU ribosomal protein L10p (P0)	Vibrio angustum S14 Gene: VAS14_19166: LSU ribosomal protein L10p (P0)	Photobacterium profundum SS9 Gene: PBPRA3434: LSU ribosomal protein L10p (P0)	LSU ribosomal protein L10p (P0)
rplL	Vibrio cholerae O1 biovar eltor str. N16961 Gene: VC0327: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio vulnificus CMCP6 Gene: VV1_1210: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio harveyi ATCC BAA-1116 Gene: VIBHAR_00226: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio parahaemolyticus RIMD 2210633 Gene: VP2923: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio shilonii AK1 Gene: VSAK1_09858: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio splendidus LGP32 Gene: VS_2964: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio fischeri ES114 Gene: VF_2415: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio salmonicida LFI1238 Gene: VSAL_I2867: LSU ribosomal protein L7/L12 (P1/P2)	Vibrio angustum S14 Gene: VAS14_19161: LSU ribosomal protein L7/L12 (P1/P2)	Photobacterium profundum SS9 Gene: PBPRA3433: LSU ribosomal protein L7/L12 (P1/P2)	LSU ribosomal protein L7/L12 (P1/P2)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog L10_leader - Vibrionales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --