Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PyrR - Mycobacteriaceae

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Actinobacteria
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Mycobacterium tuberculosis H37Rv 1 1
Mycobacterium leprae TN
Mycobacterium marinum M 7 1
Mycobacterium avium 104 7 1
Mycobacterium sp. JLS 7 1
Mycobacterium vanbaalenii PYR-1 7 1
Mycobacterium flavescens PYR-GCK 7 1
Mycobacterium smegmatis str. MC2 155 7 1
Mycobacterium abscessus ATCC 19977 7 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pyrR
*
Mycobacterium tuberculosis H37Rv

Site:
position = -51
score = 31.93
sequence = CATCCTTTAACGATC...

Gene: Rv1379: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Mycobacterium leprae TN
*
Mycobacterium marinum M

Site:
position = -51
score = 24.19
sequence = CATCCTTTAACGACC...

Gene: MMAR_2194: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium avium 104

Site:
position = -52
score = 29.23
sequence = GACATCCTTTAACGA...

Gene: MAV_3394: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium sp. JLS

Site:
position = -51
score = 25.84
sequence = CATCCTTTAACGATC...

Gene: Mjls_2403: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium vanbaalenii PYR-1

Site:
position = -51
score = 28.6
sequence = CATCCTTTAACGATC...

Gene: Mvan_2659: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium flavescens PYR-GCK

Site:
position = -53
score = 28.08
sequence = GACATCCTTTAACGA...

Gene: Mflv_3748: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium smegmatis str. MC2 155

Site:
position = -51
score = 27.09
sequence = CGTCCTTTAACGACC...

Gene: MSMEG_3042: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Mycobacterium abscessus ATCC 19977

Site:
position = -113
score = 30.05
sequence = GACATCCTTTAACGA...

Gene: MAB_2832c: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
pyrB
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1380: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium leprae TN

Gene: ML0532: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium marinum M

Gene: MMAR_2195: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium avium 104

Gene: MAV_3393: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium sp. JLS

Gene: Mjls_2404: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2660: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3747: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3043: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2831c: Aspartate carbamoyltransferase (EC 2.1.3.2)
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrC
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1381: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium leprae TN

Gene: ML0533: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium marinum M

Gene: MMAR_2196: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium avium 104

Gene: MAV_3392: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium sp. JLS

Gene: Mjls_2405: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2661: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3746: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3044: Dihydroorotase (EC 3.5.2.3)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2830c: Dihydroorotase (EC 3.5.2.3)
Dihydroorotase (EC 3.5.2.3)
Rv1382
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1382: Integral membrane protein
 
Mycobacterium leprae TN
 
Mycobacterium marinum M

Gene: MMAR_2197: Integral membrane protein
 
Mycobacterium avium 104

Gene: MAV_3391: Integral membrane protein
 
Mycobacterium sp. JLS

Gene: Mjls_2406: Integral membrane protein
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2662: Integral membrane protein
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3745: Integral membrane protein
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3045: Integral membrane protein
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2829c: Integral membrane protein
Integral membrane protein
carA
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1383: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium leprae TN

Gene: ML0535: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium marinum M

Gene: MMAR_2198: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium avium 104

Gene: MAV_3390: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium sp. JLS

Gene: Mjls_2407: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2663: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3744: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3046: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2828c: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1384: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium leprae TN

Gene: ML0536: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium marinum M

Gene: MMAR_2199: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium avium 104

Gene: MAV_3389: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium sp. JLS

Gene: Mjls_2408: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2664: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3743: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3047: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2827c: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
pyrF
 
Mycobacterium tuberculosis H37Rv

Gene: Rv1385: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium leprae TN

Gene: ML0537: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium marinum M

Gene: MMAR_2200: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium avium 104

Gene: MAV_3388: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium sp. JLS

Gene: Mjls_2409: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium vanbaalenii PYR-1

Gene: Mvan_2665: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium flavescens PYR-GCK

Gene: Mflv_3742: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium smegmatis str. MC2 155

Gene: MSMEG_3048: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
 
Mycobacterium abscessus ATCC 19977

Gene: MAB_2826c: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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