Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pyrF gene

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Actinobacteria
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Mycobacterium abscessus ATCC 19977
Position: -113
Score: 30.05
Sequence: GACATCCTTTAACGA...
Locus tag: MAB_2832c
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: MAB_2831c
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: MAB_2830c
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: MAB_2829c
Name: null
Funciton: Integral membrane protein
Locus tag: MAB_2828c
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: MAB_2827c
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: MAB_2826c
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-MAB_2829c-carA-carB-pyrF -113 30 GACATCCTTTAACGA... MAB_2832c
Mycobacterium avium 104
Position: -52
Score: 29.23
Sequence: GACATCCTTTAACGA...
Locus tag: MAV_3394
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: MAV_3393
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: MAV_3392
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: MAV_3391
Name: null
Funciton: Integral membrane protein
Locus tag: MAV_3390
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: MAV_3389
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: MAV_3388
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-MAV_3391-carA-carB-pyrF -52 29.2 GACATCCTTTAACGA... MAV_3394
Mycobacterium flavescens PYR-GCK
Position: -53
Score: 28.08
Sequence: GACATCCTTTAACGA...
Locus tag: Mflv_3748
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: Mflv_3747
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: Mflv_3746
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: Mflv_3745
Name: null
Funciton: Integral membrane protein
Locus tag: Mflv_3744
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: Mflv_3743
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: Mflv_3742
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-Mflv_3745-carA-carB-pyrF -53 28.1 GACATCCTTTAACGA... Mflv_3748
Mycobacterium marinum M
Position: -51
Score: 24.19
Sequence: CATCCTTTAACGACC...
Locus tag: MMAR_2194
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: MMAR_2195
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: MMAR_2196
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: MMAR_2197
Name: null
Funciton: Integral membrane protein
Locus tag: MMAR_2198
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: MMAR_2199
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: MMAR_2200
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-MMAR_2197-carA-carB-pyrF -51 24.2 CATCCTTTAACGACC... MMAR_2194
Mycobacterium smegmatis str. MC2 155
Position: -51
Score: 27.09
Sequence: CGTCCTTTAACGACC...
Locus tag: MSMEG_3042
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: MSMEG_3043
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: MSMEG_3044
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: MSMEG_3045
Name: null
Funciton: Integral membrane protein
Locus tag: MSMEG_3046
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: MSMEG_3047
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: MSMEG_3048
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-MSMEG_3045-carA-carB-pyrF -51 27.1 CGTCCTTTAACGACC... MSMEG_3042
Mycobacterium sp. JLS
Position: -51
Score: 25.84
Sequence: CATCCTTTAACGATC...
Locus tag: Mjls_2403
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: Mjls_2404
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: Mjls_2405
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: Mjls_2406
Name: null
Funciton: Integral membrane protein
Locus tag: Mjls_2407
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: Mjls_2408
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: Mjls_2409
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-Mjls_2406-carA-carB-pyrF -51 25.8 CATCCTTTAACGATC... Mjls_2403
Mycobacterium vanbaalenii PYR-1
Position: -51
Score: 28.6
Sequence: CATCCTTTAACGATC...
Locus tag: Mvan_2659
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: Mvan_2660
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: Mvan_2661
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: Mvan_2662
Name: null
Funciton: Integral membrane protein
Locus tag: Mvan_2663
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: Mvan_2664
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: Mvan_2665
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrR-pyrB-pyrC-Mvan_2662-carA-carB-pyrF -51 28.6 CATCCTTTAACGATC... Mvan_2659
© 2009-2020 RegPrecise