Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PyrR - Deinococcus-Thermus

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Phylum: Deinococcus-Thermus
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Deinococcus radiodurans R1
Deinococcus geothermalis DSM 11300
Deinococcus deserti VCD115
Thermus thermophilus HB27 4 1
Thermus aquaticus Y51MC23 4 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pyrR
 
Deinococcus radiodurans R1

Gene: DR1110: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0504: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
 
Deinococcus deserti VCD115

Gene: Deide_18100: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Thermus thermophilus HB27

Site:
position = -115
score = 29.64
sequence = GCCTTTAAACCGGTC...

Gene: TTC0428: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
*
Thermus aquaticus Y51MC23

Site:
position = -116
score = 32.25
sequence = TGGCCTTTAATCCGG...

Gene: TaqDRAFT_4171: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
pyrB
 
Deinococcus radiodurans R1

Gene: DR1109: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0503: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Deinococcus deserti VCD115

Gene: Deide_18110: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Thermus thermophilus HB27

Gene: TTC0427: Aspartate carbamoyltransferase (EC 2.1.3.2)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4172: Aspartate carbamoyltransferase (EC 2.1.3.2)
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrC
 
Deinococcus radiodurans R1

Gene: DR1106: Dihydroorotase (EC 3.5.2.3)
 
Deinococcus geothermalis DSM 11300

Gene: Dgeo_0502: Dihydroorotase (EC 3.5.2.3)
 
Deinococcus deserti VCD115

Gene: Deide_18120: Dihydroorotase (EC 3.5.2.3)
 
Thermus thermophilus HB27

Gene: TTC0426: Dihydroorotase (EC 3.5.2.3)
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4173: Dihydroorotase (EC 3.5.2.3)
Dihydroorotase (EC 3.5.2.3)
TTC0425
 
Deinococcus radiodurans R1
 
Deinococcus geothermalis DSM 11300
 
Deinococcus deserti VCD115
 
Thermus thermophilus HB27

Gene: TTC0425: Hypothetical conserved protein
 
Thermus aquaticus Y51MC23

Gene: TaqDRAFT_4174: Hypothetical conserved protein
Hypothetical conserved protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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