Regulog PyrR - Deinococcus-Thermus
| Regulator type: | RNA regulatory element |
| Name: | PyrR |
| RFAM: | RF00515 |
| Regulation mode: | |
| Biological process: | Pyrimidine metabolism |
| Effector: | PyrR |
| Phylum: | Deinococcus-Thermus |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - PyrR
- By effector - PyrR
- By pathway - Pyrimidine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Deinococcus radiodurans R1 | ||
| Deinococcus geothermalis DSM 11300 | ||
| Deinococcus deserti VCD115 | ||
| Thermus thermophilus HB27 | 4 | 1 |
| Thermus aquaticus Y51MC23 | 4 | 1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| pyrR |
Gene: DR1110: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
Gene: Dgeo_0504: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
Gene: Deide_18100: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
*
Thermus thermophilus HB27 Site: position = -115 score = 29.64 sequence = GCCTTTAAACCGGTC... Gene: TTC0428: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
*
Thermus aquaticus Y51MC23 Site: position = -116 score = 32.25 sequence = TGGCCTTTAATCCGG... Gene: TaqDRAFT_4171: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR |
| pyrB |
Gene: DR1109: Aspartate carbamoyltransferase (EC 2.1.3.2) |
Gene: Dgeo_0503: Aspartate carbamoyltransferase (EC 2.1.3.2) |
Gene: Deide_18110: Aspartate carbamoyltransferase (EC 2.1.3.2) |
Gene: TTC0427: Aspartate carbamoyltransferase (EC 2.1.3.2) |
Gene: TaqDRAFT_4172: Aspartate carbamoyltransferase (EC 2.1.3.2) |
Aspartate carbamoyltransferase (EC 2.1.3.2) |
| pyrC |
Gene: DR1106: Dihydroorotase (EC 3.5.2.3) |
Gene: Dgeo_0502: Dihydroorotase (EC 3.5.2.3) |
Gene: Deide_18120: Dihydroorotase (EC 3.5.2.3) |
Gene: TTC0426: Dihydroorotase (EC 3.5.2.3) |
Gene: TaqDRAFT_4173: Dihydroorotase (EC 3.5.2.3) |
Dihydroorotase (EC 3.5.2.3) |
| TTC0425 |
|
|
|
Gene: TTC0425: Hypothetical conserved protein |
Gene: TaqDRAFT_4174: Hypothetical conserved protein |
Hypothetical conserved protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |