Regulog glmS - Deinococcus-Thermus
| Regulator type: | RNA regulatory element |
| Name: | glmS |
| RFAM: | RF00234 |
| Regulation mode: | |
| Biological process: | Amino sugar metabolism |
| Effector: | Glucosamine-6-phosphate |
| Phylum: | Deinococcus-Thermus |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - glmS
- By effector - Glucosamine-6-phosphate
- By pathway - Amino sugar metabolism
| Genome | Genes | Operons |
|---|---|---|
| Deinococcus radiodurans R1 | 1 | 1 |
| Deinococcus geothermalis DSM 11300 | 1 | 1 |
| Deinococcus deserti VCD115 | 1 | 1 |
| Thermus thermophilus HB27 | ||
| Thermus aquaticus Y51MC23 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| glmS |
*
Deinococcus radiodurans R1 Site: position = -232 score = 30.27 sequence = TTCTTCGGGCAGCGC... Gene: DR0302: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Deinococcus geothermalis DSM 11300 Site: position = -249 score = 26.62 sequence = ACACAAACGGGAAGC... Gene: Dgeo_0010: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Deinococcus deserti VCD115 Site: position = -303 score = 36.38 sequence = ACGAAACAGGGCAGC... Gene: Deide_21520: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Gene: TTC1533: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Gene: TaqDRAFT_3947: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |