Regulog LysR - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | LL-2,6-Diaminopimelate |
| Phylum: | Gammaproteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - LysR
- By effector - LL-2,6-Diaminopimelate
- By pathway - Lysine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 2 | 2 |
| Edwardsiella tarda EIB202 | 2 | 2 |
| Enterobacter sp. 638 | 2 | 2 |
| Erwinia amylovora ATCC 49946 | 2 | 2 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 2 | 2 |
| Escherichia coli str. K-12 substr. MG1655 | 2 | 2 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 2 | 2 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 2 | 2 |
| Proteus mirabilis HI4320 | 2 | 2 |
| Salmonella typhimurium LT2 | 2 | 2 |
| Serratia proteamaculans 568 | 2 | 2 |
| Yersinia pestis KIM | 2 | 2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| lysR |
*
Citrobacter koseri ATCC BAA-895 Site: position = -47 score = 4.7573 sequence = CTATGCAAAAATGATATA Gene: CKO_04215: Transcriptional activator protein LysR |
*
Edwardsiella tarda EIB202 Site: position = -15 score = 5.49494 sequence = CTATTCATTTATGATATG Gene: ETAE_2912: Transcriptional activator protein LysR |
*
Enterobacter sp. 638 Site: position = -43 score = 5.03714 sequence = CTATGCAAAAATGATATG Gene: Ent638_3285: Transcriptional activator protein LysR |
*
Erwinia amylovora ATCC 49946 Site: position = -50 score = 4.60438 sequence = CTATTCATCCATGATATG Gene: EAM_2772: Transcriptional activator protein LysR |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -46 score = 4.97826 sequence = TTATTCATTTCTGATATG Gene: ECA3653: Transcriptional activator protein LysR |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -44 score = 5.03714 sequence = CTATGCAAAAATGATATG Gene: b2839: Transcriptional activator protein LysR |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -45 score = 5.03714 sequence = CTATGCAAAAATGATATG Gene: KPN_03253: Transcriptional activator protein LysR |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -47 score = 4.65061 sequence = CTATTCATCTGTGATATA Gene: plu1190: Transcriptional activator protein LysR |
*
Proteus mirabilis HI4320 Site: position = -29 score = 4.80418 sequence = CTATTCACTTGTGATATA Gene: PMI0346: Transcriptional activator protein LysR |
*
Salmonella typhimurium LT2 Site: position = -41 score = 5.03714 sequence = CTATGCAAAAATGATATG Gene: STM3014: Transcriptional activator protein LysR |
*
Serratia proteamaculans 568 Site: position = -43 score = 5.49494 sequence = CTATTCATTTATGATATG Gene: Spro_3837: Transcriptional activator protein LysR |
*
Yersinia pestis KIM Site: position = -55 score = 5.49494 sequence = CTATTCATTTATGATATG Gene: y3185: Transcriptional activator protein LysR |
Transcriptional activator protein LysR |
| CRON 2. | |||||||||||||
| lysA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -95 score = 4.7573 sequence = TATATCATTTTTGCATAG Gene: CKO_04214: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Edwardsiella tarda EIB202 Site: position = -73 score = 5.49494 sequence = CATATCATAAATGAATAG Gene: ETAE_2911: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Enterobacter sp. 638 Site: position = -96 score = 5.03714 sequence = CATATCATTTTTGCATAG Gene: Ent638_3284: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Erwinia amylovora ATCC 49946 Site: position = -94 score = 4.60438 sequence = CATATCATGGATGAATAG Gene: EAM_2771: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -107 score = 4.97826 sequence = CATATCAGAAATGAATAA Gene: ECA3652: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -95 score = 5.03714 sequence = CATATCATTTTTGCATAG Gene: b2838: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -109 score = 5.03714 sequence = CATATCATTTTTGCATAG Gene: KPN_03252: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -84 score = 4.65061 sequence = TATATCACAGATGAATAG Gene: plu1191: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Proteus mirabilis HI4320 Site: position = -98 score = 4.80418 sequence = TATATCACAAGTGAATAG Gene: PMI0347: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Salmonella typhimurium LT2 Site: position = -94 score = 5.03714 sequence = CATATCATTTTTGCATAG Gene: STM3013: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Serratia proteamaculans 568 Site: position = -107 score = 5.49494 sequence = CATATCATAAATGAATAG Gene: Spro_3836: Diaminopimelate decarboxylase (EC 4.1.1.20) |
*
Yersinia pestis KIM Site: position = -177 score = 5.49494 sequence = CATATCATAAATGAATAG Gene: y3184: Diaminopimelate decarboxylase (EC 4.1.1.20) |
Diaminopimelate decarboxylase (EC 4.1.1.20) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |