Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog GcvA - Enterobacteriales

Properties
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: dual
Biological process: Glycine metabolism
Effector: Glycine
Phylum: Gammaproteobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 34 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Citrobacter koseri ATCC BAA-895 3 2
Edwardsiella tarda EIB202 4 2
Enterobacter sp. 638 4 2
Erwinia amylovora ATCC 49946 4 2
Erwinia carotovora subsp. atroseptica SCRI1043 4 2
Escherichia coli str. K-12 substr. MG1655 4 2
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 4 2
Photorhabdus luminescens subsp. laumondii TTO1 4 2
Proteus mirabilis HI4320 4 2
Salmonella typhimurium LT2 4 2
Serratia proteamaculans 568 4 2
Yersinia pestis KIM 4 2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
gcvA
*
Citrobacter koseri ATCC BAA-895

Site:
position = -71
score = 5.54479
sequence = ATTAAAAAAACTAAT

Gene: CKO_04171: Glycine cleavage system transcriptional activator GcvA
*
Edwardsiella tarda EIB202

Site:
position = -67
score = 5.37216
sequence = ATAAAAAAAACTAAT

Gene: ETAE_0719: Glycine cleavage system transcriptional activator GcvA
*
Enterobacter sp. 638

Site:
position = -71
score = 5.37216
sequence = ATAAAAAAAACTAAT

Gene: Ent638_3254: Glycine cleavage system transcriptional activator GcvA
*
Erwinia amylovora ATCC 49946

Site:
position = -71
score = 5.37216
sequence = ATAAAAAAAACTAAT

Gene: EAM_2719: Glycine cleavage system transcriptional activator GcvA
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -193
score = 5.27073
sequence = ATTACAAAAACTAAT

Gene: ECA1015: Glycine cleavage system transcriptional activator GcvA
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -71
score = 5.54479
sequence = ATTAAAAAAACTAAT

Gene: b2808: Glycine cleavage system transcriptional activator GcvA
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -72
score = 5.37216
sequence = ATAAAAAAAACTAAT

Gene: KPN_03159: Glycine cleavage system transcriptional activator GcvA
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -65
score = 5.27073
sequence = ATTACAAAAACTAAT

Gene: plu0652: Glycine cleavage system transcriptional activator GcvA
*
Proteus mirabilis HI4320

Site:
position = -66
score = 5.37216
sequence = ATAAAAAAAACTAAT

Gene: PMI2301: Glycine cleavage system transcriptional activator GcvA
*
Salmonella typhimurium LT2

Site:
position = -70
score = 5.54479
sequence = ATTAAAAAAACTAAT

Gene: STM2982: Glycine cleavage system transcriptional activator GcvA
*
Serratia proteamaculans 568

Site:
position = -116
score = 5.54479
sequence = ATTAAAAAAACTAAT

Gene: Spro_3805: Glycine cleavage system transcriptional activator GcvA
*
Yersinia pestis KIM

Site:
position = -70
score = 5.31389
sequence = ATTATAAAAACTAAT

Gene: y3154: Glycine cleavage system transcriptional activator GcvA
Glycine cleavage system transcriptional activator GcvA
 
CRON 2.
gcvT
*
Citrobacter koseri ATCC BAA-895

Site:
position = -371
score = 5.27746
sequence = TTGAAATAATCTAAT

Site:
position = -339
score = 4.51546
sequence = ATTAGTTTTTTTAAT

Gene: CKO_04269: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Edwardsiella tarda EIB202

Site:
position = -349
score = 4.78941
sequence = GTGAAATATTCTAAT

Site:
position = -316
score = 4.19661
sequence = ATTAGTTTTTCTCAT

Gene: ETAE_2941: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Enterobacter sp. 638

Site:
position = -369
score = 5.21241
sequence = TTGAAATATTCTAAT

Site:
position = -337
score = 5.13325
sequence = ATTAGATTATCTAAT

Gene: Ent638_3324: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Erwinia amylovora ATCC 49946

Site:
position = -308
score = 4.48079
sequence = ATTAGTTTAAATAAT

Site:
position = -340
score = 5.21241
sequence = TTGAAATATTCTAAT

Gene: EAM_2791: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Erwinia carotovora subsp. atroseptica SCRI1043

Site:
position = -306
score = 5.13325
sequence = ATTATATTATCTAAT

Site:
position = -338
score = 5.23869
sequence = TTGAAAAAATCTAAT

Gene: ECA0743: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Escherichia coli str. K-12 substr. MG1655

Site:
position = -338
score = 5.0682
sequence = ATTATATTTTCTAAT

Site:
position = -370
score = 5.31623
sequence = TTGAAATAAACTAAT

Gene: b2905: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Site:
position = -340
score = 4.76881
sequence = ATTAGATTTATTAAT

Site:
position = -372
score = 5.21241
sequence = TTGAAATATTCTAAT

Gene: KPN_03341: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Photorhabdus luminescens subsp. laumondii TTO1

Site:
position = -372
score = 4.96746
sequence = CTGAAAAAATCTAAT

Site:
position = -340
score = 3.98081
sequence = ATAACTTTTTCTCAT

Gene: plu3598: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Proteus mirabilis HI4320

Site:
position = -427
score = 4.96746
sequence = CTGAAAAAATCTAAT

Gene: PMI2021: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Salmonella typhimurium LT2

Site:
position = -373
score = 5.27746
sequence = TTGAAATAATCTAAT

Site:
position = -341
score = 5.0682
sequence = ATTATATTTTCTAAT

Gene: STM3055: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Serratia proteamaculans 568

Site:
position = -396
score = 4.85363
sequence = ATTAGTTTTTCTAAT

Gene: Spro_3916: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
*
Yersinia pestis KIM

Site:
position = -363
score = 5.27746
sequence = TTGAAATAATCTAAT

Site:
position = -304
score = 4.43195
sequence = TTTAAAAAGTTTAAT

Gene: y3294: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
gcvH
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04268: Glycine cleavage system H protein
 
Edwardsiella tarda EIB202

Gene: ETAE_2940: Glycine cleavage system H protein
 
Enterobacter sp. 638

Gene: Ent638_3323: Glycine cleavage system H protein
 
Erwinia amylovora ATCC 49946

Gene: EAM_2790: Glycine cleavage system H protein
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0744: Glycine cleavage system H protein
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2904: Glycine cleavage system H protein
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03340: Glycine cleavage system H protein
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu3597: Glycine cleavage system H protein
 
Proteus mirabilis HI4320

Gene: PMI2020: Glycine cleavage system H protein
 
Salmonella typhimurium LT2

Gene: STM3054: Glycine cleavage system H protein
 
Serratia proteamaculans 568

Gene: Spro_3915: Glycine cleavage system H protein
 
Yersinia pestis KIM

Gene: y3293: Glycine cleavage system H protein
Glycine cleavage system H protein
gcvP
 
Citrobacter koseri ATCC BAA-895

Gene: CKO_04266: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Edwardsiella tarda EIB202

Gene: ETAE_2939: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Enterobacter sp. 638

Gene: Ent638_3322: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Erwinia amylovora ATCC 49946

Gene: EAM_2789: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Erwinia carotovora subsp. atroseptica SCRI1043

Gene: ECA0745: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Escherichia coli str. K-12 substr. MG1655

Gene: b2903: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Gene: KPN_03339: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Photorhabdus luminescens subsp. laumondii TTO1

Gene: plu3596: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Proteus mirabilis HI4320

Gene: PMI2019: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Salmonella typhimurium LT2

Gene: STM3053: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Serratia proteamaculans 568

Gene: Spro_3914: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
 
Yersinia pestis KIM

Gene: y3292: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise