Regulog GcvA - Enterobacteriales
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | dual |
| Biological process: | Glycine metabolism |
| Effector: | Glycine |
| Phylum: | Gammaproteobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - LysR
- By effector - Glycine
- By pathway - Glycine metabolism
| Genome | Genes | Operons |
|---|---|---|
| Citrobacter koseri ATCC BAA-895 | 3 | 2 |
| Edwardsiella tarda EIB202 | 4 | 2 |
| Enterobacter sp. 638 | 4 | 2 |
| Erwinia amylovora ATCC 49946 | 4 | 2 |
| Erwinia carotovora subsp. atroseptica SCRI1043 | 4 | 2 |
| Escherichia coli str. K-12 substr. MG1655 | 4 | 2 |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | 4 | 2 |
| Photorhabdus luminescens subsp. laumondii TTO1 | 4 | 2 |
| Proteus mirabilis HI4320 | 4 | 2 |
| Salmonella typhimurium LT2 | 4 | 2 |
| Serratia proteamaculans 568 | 4 | 2 |
| Yersinia pestis KIM | 4 | 2 |
| Genes | Function | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||||
| gcvA |
*
Citrobacter koseri ATCC BAA-895 Site: position = -71 score = 5.54479 sequence = ATTAAAAAAACTAAT Gene: CKO_04171: Glycine cleavage system transcriptional activator GcvA |
*
Edwardsiella tarda EIB202 Site: position = -67 score = 5.37216 sequence = ATAAAAAAAACTAAT Gene: ETAE_0719: Glycine cleavage system transcriptional activator GcvA |
*
Enterobacter sp. 638 Site: position = -71 score = 5.37216 sequence = ATAAAAAAAACTAAT Gene: Ent638_3254: Glycine cleavage system transcriptional activator GcvA |
*
Erwinia amylovora ATCC 49946 Site: position = -71 score = 5.37216 sequence = ATAAAAAAAACTAAT Gene: EAM_2719: Glycine cleavage system transcriptional activator GcvA |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -193 score = 5.27073 sequence = ATTACAAAAACTAAT Gene: ECA1015: Glycine cleavage system transcriptional activator GcvA |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -71 score = 5.54479 sequence = ATTAAAAAAACTAAT Gene: b2808: Glycine cleavage system transcriptional activator GcvA |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -72 score = 5.37216 sequence = ATAAAAAAAACTAAT Gene: KPN_03159: Glycine cleavage system transcriptional activator GcvA |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -65 score = 5.27073 sequence = ATTACAAAAACTAAT Gene: plu0652: Glycine cleavage system transcriptional activator GcvA |
*
Proteus mirabilis HI4320 Site: position = -66 score = 5.37216 sequence = ATAAAAAAAACTAAT Gene: PMI2301: Glycine cleavage system transcriptional activator GcvA |
*
Salmonella typhimurium LT2 Site: position = -70 score = 5.54479 sequence = ATTAAAAAAACTAAT Gene: STM2982: Glycine cleavage system transcriptional activator GcvA |
*
Serratia proteamaculans 568 Site: position = -116 score = 5.54479 sequence = ATTAAAAAAACTAAT Gene: Spro_3805: Glycine cleavage system transcriptional activator GcvA |
*
Yersinia pestis KIM Site: position = -70 score = 5.31389 sequence = ATTATAAAAACTAAT Gene: y3154: Glycine cleavage system transcriptional activator GcvA |
Glycine cleavage system transcriptional activator GcvA |
| CRON 2. | |||||||||||||
| gcvT |
*
Citrobacter koseri ATCC BAA-895 Site: position = -371 score = 5.27746 sequence = TTGAAATAATCTAAT Site: position = -339 score = 4.51546 sequence = ATTAGTTTTTTTAAT Gene: CKO_04269: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Edwardsiella tarda EIB202 Site: position = -349 score = 4.78941 sequence = GTGAAATATTCTAAT Site: position = -316 score = 4.19661 sequence = ATTAGTTTTTCTCAT Gene: ETAE_2941: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Enterobacter sp. 638 Site: position = -369 score = 5.21241 sequence = TTGAAATATTCTAAT Site: position = -337 score = 5.13325 sequence = ATTAGATTATCTAAT Gene: Ent638_3324: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Erwinia amylovora ATCC 49946 Site: position = -308 score = 4.48079 sequence = ATTAGTTTAAATAAT Site: position = -340 score = 5.21241 sequence = TTGAAATATTCTAAT Gene: EAM_2791: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Erwinia carotovora subsp. atroseptica SCRI1043 Site: position = -306 score = 5.13325 sequence = ATTATATTATCTAAT Site: position = -338 score = 5.23869 sequence = TTGAAAAAATCTAAT Gene: ECA0743: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Escherichia coli str. K-12 substr. MG1655 Site: position = -338 score = 5.0682 sequence = ATTATATTTTCTAAT Site: position = -370 score = 5.31623 sequence = TTGAAATAAACTAAT Gene: b2905: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 Site: position = -340 score = 4.76881 sequence = ATTAGATTTATTAAT Site: position = -372 score = 5.21241 sequence = TTGAAATATTCTAAT Gene: KPN_03341: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Photorhabdus luminescens subsp. laumondii TTO1 Site: position = -372 score = 4.96746 sequence = CTGAAAAAATCTAAT Site: position = -340 score = 3.98081 sequence = ATAACTTTTTCTCAT Gene: plu3598: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Proteus mirabilis HI4320 Site: position = -427 score = 4.96746 sequence = CTGAAAAAATCTAAT Gene: PMI2021: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Salmonella typhimurium LT2 Site: position = -373 score = 5.27746 sequence = TTGAAATAATCTAAT Site: position = -341 score = 5.0682 sequence = ATTATATTTTCTAAT Gene: STM3055: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Serratia proteamaculans 568 Site: position = -396 score = 4.85363 sequence = ATTAGTTTTTCTAAT Gene: Spro_3916: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
*
Yersinia pestis KIM Site: position = -363 score = 5.27746 sequence = TTGAAATAATCTAAT Site: position = -304 score = 4.43195 sequence = TTTAAAAAGTTTAAT Gene: y3294: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) |
| gcvH |
Gene: CKO_04268: Glycine cleavage system H protein |
Gene: ETAE_2940: Glycine cleavage system H protein |
Gene: Ent638_3323: Glycine cleavage system H protein |
Gene: EAM_2790: Glycine cleavage system H protein |
Gene: ECA0744: Glycine cleavage system H protein |
Gene: b2904: Glycine cleavage system H protein |
Gene: KPN_03340: Glycine cleavage system H protein |
Gene: plu3597: Glycine cleavage system H protein |
Gene: PMI2020: Glycine cleavage system H protein |
Gene: STM3054: Glycine cleavage system H protein |
Gene: Spro_3915: Glycine cleavage system H protein |
Gene: y3293: Glycine cleavage system H protein |
Glycine cleavage system H protein |
| gcvP |
Gene: CKO_04266: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: ETAE_2939: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: Ent638_3322: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: EAM_2789: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: ECA0745: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: b2903: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: KPN_03339: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: plu3596: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: PMI2019: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: STM3053: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: Spro_3914: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Gene: y3292: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |