Regulog glmS - Clostridiaceae

Properties
Regulator type:	RNA regulatory element
Name:	glmS
RFAM:	RF00234
Regulation mode:
Biological process:	Amino sugar metabolism
Effector:	Glucosamine-6-phosphate
Phylum:	Firmicutes

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - glmS
By effector - Glucosamine-6-phosphate
By pathway - Amino sugar metabolism

Statistics of regulated genes
Genome	Genes	Operons
Clostridium kluyveri DSM 555	1	1
Clostridium sp. SS2/1	1	1
Clostridium cellulolyticum H10	1	1
Clostridium phytofermentans ISDg	1	1
Clostridium tetani E88	1	1
Clostridium acetobutylicum ATCC 824	1	1
Clostridium botulinum A str. ATCC 3502	1	1
Clostridium novyi NT	1	1
Clostridium perfringens ATCC 13124	1	1
Clostridium difficile 630	1	1
Clostridium beijerincki NCIMB 8052	1	1
Clostridium sp. OhILAs	1	1
Clostridium sp. L2-50	1	1
Clostridium scindens ATCC 35704
Clostridium nexile DSM 1787
Clostridium leptum DSM 753
Clostridium hiranonis DSM 13275	1	1
Clostridium butyricum 5521	1	1
Clostridium bolteae ATCC BAA-613	1	1
Clostridium bartlettii DSM 16795	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																					Function

CRON 1.
glmS	* Clostridium kluyveri DSM 555 Site: position = -372 score = 105.41 sequence = AAGCATAAAAAGCGC... Gene: CKL_0317: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium sp. SS2/1 Site: position = -291 score = 80.25 sequence = ACAGAATTTAAGCGC... Gene: CLOSS21_00892: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium cellulolyticum H10 Site: position = -432 score = 82.77 sequence = GAATTAAAAAGGCGC... Gene: Ccel_1205: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium phytofermentans ISDg Site: position = -209 score = 67.01 sequence = AGATAAAATTAGCGC... Gene: null: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium tetani E88 Site: position = -296 score = 95.68 sequence = AAAATATAATAAAGC... Gene: CTC02543: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium acetobutylicum ATCC 824 Site: position = -249 score = 123.8 sequence = TTATAGTTAAAGCGC... Gene: CAC0158: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium botulinum A str. ATCC 3502 Site: position = -224 score = 58.53 sequence = GAAACTCAGATTAGC... Gene: CBO3410: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium novyi NT Site: position = -221 score = 81.5 sequence = TTTGAGTAAGTTCGC... Gene: NT01CX_1166: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium perfringens ATCC 13124 Site: position = -302 score = 97.87 sequence = ATAATAGATTAAAGC... Gene: CPF_2636: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium difficile 630 Site: position = -232 score = 97.41 sequence = CACCTTTCTAAGCGC... Gene: CD0120: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium beijerincki NCIMB 8052 Site: position = -277 score = 85.48 sequence = GTAAATTCAACTATC... Gene: Cbei_0246: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium sp. OhILAs Site: position = -319 score = 107.29 sequence = AATTTAATGAAAAGC... Gene: Clos_2836: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium sp. L2-50 Site: position = -311 score = 44.6 sequence = TTTAGAAATCTTAGC... Gene: CLOL250_01278: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Clostridium scindens ATCC 35704	Clostridium nexile DSM 1787	Clostridium leptum DSM 753	* Clostridium hiranonis DSM 13275 Site: position = -218 score = 97.32 sequence = TTCTGTTTTTAGCGC... Gene: CLOHIR_00014: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium butyricum 5521 Site: position = -431 score = 96.86 sequence = AAATTTTTAAAGCGC... Gene: CBY_2954: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium bolteae ATCC BAA-613 Site: position = -328 score = 53.26 sequence = ATAGCAAAGCTAAGC... Gene: CLOBOL_03730: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	* Clostridium bartlettii DSM 16795 Site: position = -205 score = 90.93 sequence = TAGTGTTTATAAAGC... Gene: CLOBAR_00755: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)	Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)