Regulog T-box(Val) - Chloroflexia
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Val-tRNA |
| Phylum: | Chloroflexi |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - T-box
- By effector - Val-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Chloroflexus aggregans DSM 9485 | ||
| Chloroflexus sp. Y-400-fl | ||
| Roseiflexus castenholzii DSM 13941 | ||
| Roseiflexus sp. RS-1 | ||
| Herpetosiphon aurantiacus ATCC 23779 | 2 | 1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| Haur_3008 |
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Herpetosiphon aurantiacus ATCC 23779 Site: position = -274 score = 116.94 sequence = ACAAACGACGTTGAA... Gene: Haur_2856: putative membrane protein. |
putative membrane protein. |
| valS |
Gene: Cagg_0010: Valyl-tRNA synthetase (EC 6.1.1.9) |
Gene: Chy400_2861: Valyl-tRNA synthetase (EC 6.1.1.9) |
Gene: Rcas_0367: Valyl-tRNA synthetase (EC 6.1.1.9) |
Gene: RoseRS_0129: Valyl-tRNA synthetase (EC 6.1.1.9) |
Gene: Haur_2855: Valyl-tRNA synthetase (EC 6.1.1.9) |
Valyl-tRNA synthetase (EC 6.1.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |