Regulog T-box(Pro) - Chloroflexia
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Pro-tRNA |
| Phylum: | Chloroflexi |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - T-box
- By effector - Pro-tRNA
- By pathway - Amino acid metabolism
| Genome | Genes | Operons |
|---|---|---|
| Chloroflexus aggregans DSM 9485 | ||
| Chloroflexus sp. Y-400-fl | ||
| Roseiflexus castenholzii DSM 13941 | ||
| Roseiflexus sp. RS-1 | ||
| Herpetosiphon aurantiacus ATCC 23779 | 1 | 1 |
| Genes | Function | |||||
|---|---|---|---|---|---|---|
| CRON 1. | ||||||
| proS |
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Herpetosiphon aurantiacus ATCC 23779 Site: position = -306 score = 84.03 sequence = AGCAAACGTTGATGG... Gene: Haur_3563: Prolyl-tRNA synthetase (EC 6.1.1.15) |
Prolyl-tRNA synthetase (EC 6.1.1.15) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |