Regulog MOCO_RNA_motif - Clostridiaceae
Regulator type: | RNA regulatory element |
Name: | MOCO_RNA_motif |
RFAM: | RF01055 |
Regulation mode: | |
Biological process: | Molybdopterin biosynthesis; Molybdenum homeostasis |
Effector: | Molybdenum |
Phylum: | Firmicutes |

Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - MOCO_RNA_motif
- By effector - Molybdenum
- By pathway - Molybdopterin biosynthesis
- By pathway - Molybdenum homeostasis
Genome | Genes | Operons |
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Clostridium kluyveri DSM 555 | ||
Clostridium sp. SS2/1 | ||
Clostridium cellulolyticum H10 | ||
Clostridium phytofermentans ISDg | ||
Clostridium tetani E88 | ||
Clostridium acetobutylicum ATCC 824 | ||
Clostridium botulinum A str. ATCC 3502 | ||
Clostridium novyi NT | ||
Clostridium perfringens ATCC 13124 | 5 | 1 |
Clostridium difficile 630 | ||
Clostridium beijerincki NCIMB 8052 | ||
Clostridium sp. OhILAs | 1 | 1 |
Clostridium sp. L2-50 | ||
Clostridium scindens ATCC 35704 | 13 | 2 |
Clostridium nexile DSM 1787 | ||
Clostridium leptum DSM 753 | ||
Clostridium hiranonis DSM 13275 | ||
Clostridium butyricum 5521 | 7 | 1 |
Clostridium bolteae ATCC BAA-613 | ||
Clostridium bartlettii DSM 16795 | 7 | 1 |
Genes | Function | ||||||||||||||||||||
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CRON 1. | |||||||||||||||||||||
tupA |
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Gene: CBO1946: ABC-type tungstate transport system, periplasmic binding protein |
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Clostridium sp. OhILAs Site: position = -252 score = 74.5 sequence = TAACTAAATATCTCC... Gene: Clos_2434: ABC-type tungstate transport system, periplasmic binding protein |
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Clostridium scindens ATCC 35704 Site: position = -220 score = 66.1 sequence = CAATTGCAGGAATTC... Gene: CLOSCI_03477: ABC-type tungstate transport system, periplasmic binding protein |
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ABC-type tungstate transport system, periplasmic binding protein |
tupB |
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Gene: CBO1945: ABC-type tungstate transport system, permease protein |
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Gene: Clos_2216: ABC-type tungstate transport system, permease protein |
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Gene: CLOSCI_03478: ABC-type tungstate transport system, permease protein |
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ABC-type tungstate transport system, permease protein |
tupC |
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Gene: CBO1944: ABC-type tungstate transport system, ATP-binding protein |
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Gene: Clos_2215: ABC-type tungstate transport system, ATP-binding protein |
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Gene: CLOSCI_03479: ABC-type tungstate transport system, ATP-binding protein |
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ABC-type tungstate transport system, ATP-binding protein |
moeA |
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Gene: CAC2021: Molybdopterin biosynthesis protein MoeA |
Gene: CBO1942: Molybdopterin biosynthesis protein MoeA |
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Gene: Clos_1174: Molybdopterin biosynthesis protein MoeA |
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Gene: CLOSCI_03480: Molybdopterin biosynthesis protein MoeA |
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Molybdopterin biosynthesis protein MoeA |
moeA2 |
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Gene: CAC2020: Molybdopterin biosynthesis protein MoeA / Periplasmic molybdate-binding domain |
Gene: CBO1941: Molybdopterin biosynthesis protein MoeA / Periplasmic molybdate-binding domain |
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Gene: Clos_1175: Molybdopterin biosynthesis protein MoeA / Periplasmic molybdate-binding domain |
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Gene: CLOSCI_03481: Molybdopterin biosynthesis protein MoeA / Periplasmic molybdate-binding domain |
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Molybdopterin biosynthesis protein MoeA / Periplasmic molybdate-binding domain |
CRON 2. | |||||||||||||||||||||
fdx |
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*2
Clostridium scindens ATCC 35704 Site: position = -175 score = 43.06 sequence = AAGTAAATAAACTCC... Gene: CLOSCI_03468: Ferredoxin Gene: CLOSCI_03473: Ferredoxin |
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Ferredoxin |
aorA |
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Gene: CBO1935: Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5) |
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Gene: CLOSCI_03469: Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5) |
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Tungsten-containing aldehyde:ferredoxin oxidoreductase (EC 1.2.7.5) |
moaD |
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Gene: CLOSCI_03470: hypothetical protein |
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hypothetical protein |
CKL_3023 |
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Gene: CLOSCI_03471: hypothetical protein |
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hypothetical protein |
CLOSCI_03472 |
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Gene: CLOSCI_03472: hypothetical protein |
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hypothetical protein |
moaA |
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Gene: CLOSS21_01696: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Ccel_1604: Molybdenum cofactor biosynthesis protein MoaA |
Gene: null: Molybdenum cofactor biosynthesis protein MoaA |
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Gene: CAC1993: Molybdenum cofactor biosynthesis protein MoaA |
Gene: CBO1940: Molybdenum cofactor biosynthesis protein MoaA |
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Gene: CPF_2045: Molybdenum cofactor biosynthesis protein MoaA |
Gene: CD1713: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Cbei_1989: Molybdenum cofactor biosynthesis protein MoaA |
Gene: Clos_0570: Molybdenum cofactor biosynthesis protein MoaA |
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Gene: CLOSCI_03474: Molybdenum cofactor biosynthesis protein MoaA |
Gene: CLONEX_02954: Molybdenum cofactor biosynthesis protein MoaA |
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Gene: CBY_3336: Molybdenum cofactor biosynthesis protein MoaA |
Gene: CLOBOL_05455: Molybdenum cofactor biosynthesis protein MoaA |
Gene: CLOBAR_00265: Molybdenum cofactor biosynthesis protein MoaA |
Molybdenum cofactor biosynthesis protein MoaA |
moaB |
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Gene: Ccel_1602: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
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Gene: CAC1991: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Gene: CBO1938: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
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Gene: CPF_2044: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Gene: CD1715: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Gene: Cbei_1991: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Gene: Clos_0571: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
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Gene: CLOSCI_03475: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Gene: CLONEX_01416: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
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Gene: CBY_3337: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
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Gene: CLOBAR_00266: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase |
moeA |
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Gene: CLOSS21_01690: Molybdopterin biosynthesis protein MoeA |
Gene: Ccel_1606: Molybdopterin biosynthesis protein MoeA |
Gene: null: Molybdopterin biosynthesis protein MoeA |
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Gene: CAC2021: Molybdopterin biosynthesis protein MoeA |
Gene: CBO1942: Molybdopterin biosynthesis protein MoeA |
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*2
Clostridium perfringens ATCC 13124 Site: position = -344 score = 59.16 sequence = AATTAGTATAAATCT... Gene: CPF_2048: Molybdopterin biosynthesis protein MoeA Gene: CPF_2046: Molybdopterin biosynthesis protein MoeA |
Gene: CD1081: Molybdopterin biosynthesis protein MoeA |
Gene: Cbei_1988: Molybdopterin biosynthesis protein MoeA |
3
Clostridium sp. OhILAs Gene: Clos_1103: Molybdopterin biosynthesis protein MoeA Gene: Clos_1102: Molybdopterin biosynthesis protein MoeA Gene: Clos_0210: Molybdopterin biosynthesis protein MoeA |
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Gene: CLOSCI_02036: Molybdopterin biosynthesis protein MoeA |
Gene: CLONEX_01415: Molybdopterin biosynthesis protein MoeA |
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*2
Clostridium butyricum 5521 Site: position = -461 score = 64.51 sequence = AATTAAATAATCTCC... Gene: CBY_3332: Molybdopterin biosynthesis protein MoeA Gene: CBY_3333: Molybdopterin biosynthesis protein MoeA |
Gene: CLOBOL_05457: Molybdopterin biosynthesis protein MoeA |
*2
Clostridium bartlettii DSM 16795 Site: position = -212 score = 65.69 sequence = AATTAAATATTCTCC... Gene: CLOBAR_00261: Molybdopterin biosynthesis protein MoeA Gene: CLOBAR_00263: Molybdopterin biosynthesis protein MoeA |
Molybdopterin biosynthesis protein MoeA |
moaC |
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Gene: CLOSS21_01695: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Ccel_1603: Molybdenum cofactor biosynthesis protein MoaC |
Gene: null: Molybdenum cofactor biosynthesis protein MoaC |
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Gene: CAC1992: Molybdenum cofactor biosynthesis protein MoaC |
Gene: CBO1939: Molybdenum cofactor biosynthesis protein MoaC |
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Gene: CPF_2340: Molybdenum cofactor biosynthesis protein MoaC |
Gene: CD1714: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Cbei_1990: Molybdenum cofactor biosynthesis protein MoaC |
Gene: Clos_1812: Molybdenum cofactor biosynthesis protein MoaC |
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Gene: CLOSCI_02916: Molybdenum cofactor biosynthesis protein MoaC |
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Gene: CBY_3334: Molybdenum cofactor biosynthesis protein MoaC |
Gene: CLOBOL_05456: Molybdenum cofactor biosynthesis protein MoaC |
Gene: CLOBAR_00264: Molybdenum cofactor biosynthesis protein MoaC |
Molybdenum cofactor biosynthesis protein MoaC |
mobB |
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Gene: Ccel_1605: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
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Gene: CPF_2049: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
Gene: CD1082: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
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Gene: Clos_1104: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
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Gene: CLOSCI_02035: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
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Gene: CBY_3335: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
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Gene: CLOBAR_00262: Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
Molybdopterin-guanine dinucleotide biosynthesis protein MobB |
moaB |
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Gene: CLOSS21_01694: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: Ccel_1601: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: null: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
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3
Clostridium acetobutylicum ATCC 824 Gene: CAC2022: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) Gene: CAC1994: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) Gene: CAC0283: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: CBO1943: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
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Gene: CPF_2343: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: CD1712: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: Cbei_3803: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: Clos_1811: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
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Gene: CLOSCI_00687: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: CLONEX_01414: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
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Gene: CBY_3338: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: CLOBOL_05454: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Gene: CLOBAR_00267: Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
Molybdenum cofactor biosynthesis protein MoaB @ Molybdopterin biosynthesis Mog protein, molybdochelatase (wtpC) / Molybdopterin-guanine dinucleotide biosynthesis protein MobB (moaB) |
mobA |
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Gene: CPF_2047: Molybdopterin-guanine dinucleotide biosynthesis protein MobA |
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Gene: Clos_1095: Molybdopterin-guanine dinucleotide biosynthesis protein MobA |
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Gene: CBY_3330: Molybdopterin-guanine dinucleotide biosynthesis protein MobA |
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Gene: CLOBAR_00260: Molybdopterin-guanine dinucleotide biosynthesis protein MobA |
Molybdopterin-guanine dinucleotide biosynthesis protein MobA |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |