Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog S15 - Streptococcaceae

Properties
Regulator type: RNA regulatory element
Name: S15
RFAM: RF00114
Regulation mode:
Biological process: Ribosome biogenesis
Effector:
Phylum: Firmicutes
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Streptococcus pneumoniae TIGR4 1 1
Streptococcus gallolyticus UCN34 1 1
Streptococcus dysgalactiae subsp. equisimilis GGS_124 1 1
Streptococcus suis 05ZYH33 1 1
Lactococcus lactis subsp. lactis Il1403 1 1
Lactococcus lactis subsp. cremoris SK11 1 1
Streptococcus uberis 0140J 1 1
Streptococcus agalactiae 2603V/R 1 1
Streptococcus sanguinis SK36 1 1
Streptococcus pyogenes M1 GAS 1 1
Streptococcus mutans UA159 1 1
Streptococcus thermophilus CNRZ1066 1 1
Streptococcus gordonii str. Challis substr. CH1 1 1
Streptococcus equi subsp. zooepidemicus MGCS10565 1 1
Streptococcus mitis B6 1 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
rpsO
*
Streptococcus pneumoniae TIGR4

Site:
position = -61
score = 27.37
sequence = TCTTGGTTACAGGCA...

Gene: SP_1626: SSU ribosomal protein S15p (S13e)
*
Streptococcus gallolyticus UCN34

Site:
position = -63
score = 24.95
sequence = TTGGTTGTAGGAGAC...

Gene: GALLO_0219: SSU ribosomal protein S15p (S13e)
*
Streptococcus dysgalactiae subsp. equisimilis GGS_124

Site:
position = -61
score = 24.37
sequence = TTCTTGGTTTTAGGA...

Gene: SDEG_0253: SSU ribosomal protein S15p (S13e)
*
Streptococcus suis 05ZYH33

Site:
position = -70
score = 21.13
sequence = AGCTTTTTCTTGAGT...

Gene: SSU05_1934: SSU ribosomal protein S15p (S13e)
*
Lactococcus lactis subsp. lactis Il1403

Site:
position = -67
score = 25.7
sequence = CGTTCTTGGTTTCAT...

Gene: L0392: SSU ribosomal protein S15p (S13e)
*
Lactococcus lactis subsp. cremoris SK11

Site:
position = -67
score = 25.7
sequence = CGTTCTTGGTTTCAT...

Gene: LACR_2081: SSU ribosomal protein S15p (S13e)
*
Streptococcus uberis 0140J

Site:
position = -60
score = 27.14
sequence = TTCTTGGTTTTAGGA...

Gene: SUB0266: SSU ribosomal protein S15p (S13e)
*
Streptococcus agalactiae 2603V/R

Site:
position = -61
score = 24.14
sequence = TTCTTGGTTTTAGGA...

Gene: SAG0202: SSU ribosomal protein S15p (S13e)
*
Streptococcus sanguinis SK36

Site:
position = -35
score = 27.78
sequence = TCTTGGTTGCAGGCC...

Gene: SSA_2058: SSU ribosomal protein S15p (S13e)
*
Streptococcus pyogenes M1 GAS

Site:
position = -63
score = 25.75
sequence = TTTTCTTGGTTTTAG...

Gene: SPy1955: SSU ribosomal protein S15p (S13e)
*
Streptococcus mutans UA159

Site:
position = -59
score = 19.73
sequence = TTGGTTCTAGGATTC...

Gene: SMU.154: SSU ribosomal protein S15p (S13e)
*
Streptococcus thermophilus CNRZ1066

Site:
position = -63
score = 26.2
sequence = TCTTTCTTGGTTTTA...

Gene: str0154: SSU ribosomal protein S15p (S13e)
*
Streptococcus gordonii str. Challis substr. CH1

Site:
position = -60
score = 27.78
sequence = TTGGTTGCAGGCCAT...

Gene: SGO_0333: SSU ribosomal protein S15p (S13e)
*
Streptococcus equi subsp. zooepidemicus MGCS10565

Site:
position = -64
score = 30.1
sequence = ACTTTTTCTTGGTTT...

Gene: Sez_1758: SSU ribosomal protein S15p (S13e)
*
Streptococcus mitis B6

Site:
position = -59
score = 27.37
sequence = TTGGTTACAGGCATG...

Gene: smi_0656: SSU ribosomal protein S15p (S13e)
SSU ribosomal protein S15p (S13e)
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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